Transcript Information: R_Transcript_22279.p3


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7616419881875
Replicate 26.390178387569
Replicate 32.4898627821905
Condition 2: 8 Hour
Replicate 18.2506718843978
Replicate 29.965175603137
Replicate 37.4974043866816
Condition 3: 24 Hour
Replicate 18.2348656360243
Replicate 25.2740836477467
Replicate 34.9961065046179


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22279.p3 GENE.R_Transcript_22279~~R_Transcript_22279.p3 ORF type:complete len:92 (+),score=3.41,zf-RVT|PF13966.2|6e-05 R_Transcript_22279:386-661(+)
ATGGTGAAGCAACAACTTGTAATGCCAAAGTGGAGATTTATCAGCTGGTTAACTCTCAAAAGCAGGCTGCCTATGTGGTCACAGCCCAGTAGATGTCCTATTTGCTGCATACAGGAGGAAACTTACCAGCATCTATTTATAGATTGTGAATTCTTTCATGTACTATGGGAAAGGCTATCAACGTGGGTTGGCTTGTCTGTTACAAACAGACGCGGGCAGAGATGGTTAATGAAATACTCAGGAAATATAAAAGAAACAGTTGTAAGCATCTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22279.p3 GENE.R_Transcript_22279~~R_Transcript_22279.p3 ORF type:complete len:92 (+),score=3.41,zf-RVT|PF13966.2|6e-05 R_Transcript_22279:386-661(+)
MVKQQLVMPKWRFISWLTLKSRLPMWSQPSRCPICCIQEETYQHLFIDCEFFHVLWERLSTWVGLSVTNRRGQRWLMKYSGNIKETVVSIW*

Click here to download the sequence:
Link to NCBI Protein BLAST