Transcript Information: R_Transcript_222819.p1


Annotated TAIR IDAT4G40070.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18576533-18577504 | Forward length=323
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8819604122649
Replicate 211.070776583139
Replicate 38.7462089003491
Condition 2: 8 Hour
Replicate 116.472309146329
Replicate 217.888705472949
Replicate 315.593883669332
Condition 3: 24 Hour
Replicate 17.8265251912628
Replicate 26.4160753136225
Replicate 37.5612070736554


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_222819.p1 GENE.R_Transcript_222819~~R_Transcript_222819.p1 ORF type:complete len:220 (+),score=25.49,zf-RING_2|PF13639.2|7.1e-14,zf-RING_11|PF17123.1|2.9e-10,zf-RING_11|PF17123.1|1.5e+04,zf-rbx1|PF12678.3|1.1e-08,zf-C3HC4_2|PF13923.2|2.8e-06,zf-ANAPC11|PF12861.3|2e-05 R_Transcript_222819:122-781(+)
ATGCCGAGAATCAATCGCCGCCAGCCCCAACACCAAAATGTTGTCAACAATTTCCCTCCATCACCCCCCGGTTTCTCAAGATTCCGGCAACACCACCAACACTCACCGGAAACCTCAACAACAACATCATCATCATCAACAACAACAACAGCAACAACAACAAAAGCAAACCCACGATTACTATCCCTTCTCCTACAAGCCCTAATAATGGCCTTCATAATCTCTCTCTTCTTCATCTTCGTAGGCGTAGCTGCCATCATCTTCATCCACCTCTGTATCGCCGGTGGTGCTCTCCACCGCCGCCACCGCCGCCACAATCACAACAACCACCGAAGCCATCACCGACCCATTTCAGAAGACGGTGAATCCTCATCTGGGTATTCCTCAGATGAACTTAATTCCCTCCCTAAATCCTCCTTCCATGGTGGTGAAAACACCAATTGTGCCATTTGTTTGGATAATCTCCTTGATGGTGAAACTTGCCGTGTATTGCCGTCTTGTAAGCATGTGTTCCACTTGGATTGTGTTGATAAGTGGCTCTCTGAAGTCCCTGCTTGCCCTGTTTGTAGAGGTTGTGTTAGATTGGAAAAAAACAAGAACCCCCAAAAAATTGGGGATCATAGGATTGATTGGGAGCATTTGTGGGCTGCTTATGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_222819.p1 GENE.R_Transcript_222819~~R_Transcript_222819.p1 ORF type:complete len:220 (+),score=25.49,zf-RING_2|PF13639.2|7.1e-14,zf-RING_11|PF17123.1|2.9e-10,zf-RING_11|PF17123.1|1.5e+04,zf-rbx1|PF12678.3|1.1e-08,zf-C3HC4_2|PF13923.2|2.8e-06,zf-ANAPC11|PF12861.3|2e-05 R_Transcript_222819:122-781(+)
MPRINRRQPQHQNVVNNFPPSPPGFSRFRQHHQHSPETSTTTSSSSTTTTATTTKANPRLLSLLLQALIMAFIISLFFIFVGVAAIIFIHLCIAGGALHRRHRRHNHNNHRSHHRPISEDGESSSGYSSDELNSLPKSSFHGGENTNCAICLDNLLDGETCRVLPSCKHVFHLDCVDKWLSEVPACPVCRGCVRLEKNKNPQKIGDHRIDWEHLWAAYG*

Click here to download the sequence:
Link to NCBI Protein BLAST