Transcript Information: R_Transcript_222853.p1


Annotated TAIR IDAT1G13260.1
Annotated Gene Namerelated to ABI3/VP1 1
Annotated Gene Symbol(s)RAV1, EDF4
Annotation TypeHomolog
Chromosome Positionchr1:4542386-4543420 | Forward length=344
E-Value2E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6104669215625
Replicate 20.49155218365915
Replicate 30.53627813770257
Condition 2: 8 Hour
Replicate 10.3275700996287
Replicate 20.44871334798366
Replicate 30.24283091130952
Condition 3: 24 Hour
Replicate 10.23034589191676
Replicate 20.22129022298238
Replicate 30.21960907712606


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_222853.p1 GENE.R_Transcript_222853~~R_Transcript_222853.p1 ORF type:5prime_partial len:299 (+),score=20.71,B3|PF02362.17|1.4e-25,AP2|PF00847.16|1.8e-05 R_Transcript_222853:3-899(+)
AAGCAGAAATTGCCGTCCTCAAAGTACAAAGGGGTAGTCCCACAGCCCAACGGCCGGTGGGGGGCCCAGCTCTACGTGGGTCACTTGAGGATCTGGCTGGGCACCTTCGACAGGCAAGACCAGGCTGCTCAAGCCTACGACATCGCGGCAATTAAATTCCGAGGGCCCCACGCCATAAGCAACCTCCCCATCCACCACTACAGTAGGCCCCACCTGGAGTTCCTAGCCTCCCTATCCAAAGCCCAGGTCGTGGATATGCTCAGAGGCCACACCTACTACGATGAGCTCGCCCGGTTCATGCGGATCCGGATAGCTAAGAACCGCCAAAAGCGGACTGGGTGGGGCTGCAGCTTGGTGGAGGATCTAGACCATCGAGAGAGGCTGTTCCAGAAGGTTCTGACCCCTAGTGACGTCGGTAAGCTCCATCGTCTGGTGATCCCTAGATGTCATGCCGAGAGACACCTCCCGAGTTTTGTCGGTGATGACGGTCTCACCGGAATGATGTTGACATTTGAGGATGTGAGTGGGAGTAGAGTATGGAGGTTTAAGTACAGGTACTGGAGTAGTAGCCAGAACTATGTGTTGACGAAAGGATGGCCTCAGTTTGTTAAGGATAAGGGTTTGAAAGCTGGGGATGTGGTCACATTTTTTAGCTCAATAGGTCCTCAAAAACAGCTTTACATTGAGTCCCGTTCCAGGCCGTTTGTTCCCAAAGAGGCCAAATTACCAACATCTAGATCTAGTGCTACTGGCAATAGTCATCTGGATCTTGATGATTTTGGTGGCGGTGGTGATTGCGGCAGTGATTATGTGGATTTGGTAAGGTCCAGCAAGCTGAGGTTATTTGGGGTTGATATTTGTCCAATGATCCCTGTTAGTATTAGTACTCCTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_222853.p1 GENE.R_Transcript_222853~~R_Transcript_222853.p1 ORF type:5prime_partial len:299 (+),score=20.71,B3|PF02362.17|1.4e-25,AP2|PF00847.16|1.8e-05 R_Transcript_222853:3-899(+)
KQKLPSSKYKGVVPQPNGRWGAQLYVGHLRIWLGTFDRQDQAAQAYDIAAIKFRGPHAISNLPIHHYSRPHLEFLASLSKAQVVDMLRGHTYYDELARFMRIRIAKNRQKRTGWGCSLVEDLDHRERLFQKVLTPSDVGKLHRLVIPRCHAERHLPSFVGDDGLTGMMLTFEDVSGSRVWRFKYRYWSSSQNYVLTKGWPQFVKDKGLKAGDVVTFFSSIGPQKQLYIESRSRPFVPKEAKLPTSRSSATGNSHLDLDDFGGGGDCGSDYVDLVRSSKLRLFGVDICPMIPVSISTPT*

Click here to download the sequence:
Link to NCBI Protein BLAST