Transcript Information: R_Transcript_222868.p1


Annotated TAIR IDAT1G03475.1
Annotated Gene NameCoproporphyrinogen III oxidase
Annotated Gene Symbol(s)LIN2, HEMF1, ATCPO-I
Annotation TypeOrtholog
Chromosome Positionchr1:869302-871175 | Reverse length=386
E-Value5E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2616953772531
Replicate 25.6240090400798
Replicate 35.6682488439459
Condition 2: 8 Hour
Replicate 19.119735414025
Replicate 28.2142014926804
Replicate 38.7979745353916
Condition 3: 24 Hour
Replicate 15.5051884678678
Replicate 25.9076586314046
Replicate 37.6495294441452


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_222868.p1 GENE.R_Transcript_222868~~R_Transcript_222868.p1 ORF type:complete len:392 (+),score=48.18,Coprogen_oxidas|PF01218.14|4.6e-137 R_Transcript_222868:135-1310(+)
ATGGCGACATCAACACTTTCATCATCACCTTCACCCCTTTCCCTCTCTCTCACTTGTTCATCTAAACTCACTCCCTTCTCTCTTATACCCTCAATCTCTCGCACCACCATTACAACCCAGCAACACCTCTTTCTCAAAAGAAAGTCAAACCCCCAAGCAATTGCAATGCATAAACACCAAACCCCAATATACTCTGACCCATCTCCCCCTTCTCTCCTTCGTCACTCAGACGGGTCCGACCCGTCTTCCTCGATCCGTATCCGGTTCGAGTCCATGATCCGGGATGTCCAAGACAAGGTCTGTGAAGCCATTGAAACCACTGACGGTGGCGCCAAATTCAAGGAGGACACGTGGACACGCCCTGGCGGCGGTGGCGGTATCAGCCGTGTCCTCCAAGACGGCGCCGTTTGGGAGAAAGCAGGCGTCAATGTTTCCGTAGTTTATGGAGAAATGCCGCCAGAAGCTTACCGTTCTGCTACCGGCGACGATCACCGAAAACCGGGCCCGGTCCCTTTCTTTGCCGCCGGGATCAGCTCCGTTCTCCACCCCAAGAACCCCTTTGCCCCCACAATGCACTTCAACTTCCGCTACTTTGAAACAGACACTTCGGCGGTTGATGTTGCCGGAGCTCCGAGGAAGTGGTGGTTTGGGGGTGGCACCGACTTGACTCCGGCGTACCTATTCGAGGAGGATGCTAGGCACTTCCACCGTATACAAAAGAATGCATGTGATAAATATAATCCCATGTTTTACCCCAAGTTCAAGAAATGGTGTGATGAGTATTTCTATATAAAGCATAGAGGGGAAAGGAGAGGGGTAGGGGGGATTTTCTTTGATGACCTTAATGAGTATGATCAAGAAATGTTGCTGAGTTTTGCCACTGAATGTGCTAATTCTGTGGTACCTTCTTACATACCGATTATAGAGAAGAGGAAAGACATGTCTTTTAATGAGAAGCATAAGGCTTGGCAGCAGCTTAGAAGGGGGAGATATGTGGAGTTTAACTTGGTTTACGATCGAGGGACCACATTTGGGCTTCAGACTGGAGGGAGGGTTGAGAGCATTCTTGTTTCGATGCCATTGACGGCTCGTTGGGAGTATGATCATCAACCTGAGCTAGGGACTGAGGAGTGGAAGTTGTTGGATGCTTGTATCAATCCTAAAGAGTGGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_222868.p1 GENE.R_Transcript_222868~~R_Transcript_222868.p1 ORF type:complete len:392 (+),score=48.18,Coprogen_oxidas|PF01218.14|4.6e-137 R_Transcript_222868:135-1310(+)
MATSTLSSSPSPLSLSLTCSSKLTPFSLIPSISRTTITTQQHLFLKRKSNPQAIAMHKHQTPIYSDPSPPSLLRHSDGSDPSSSIRIRFESMIRDVQDKVCEAIETTDGGAKFKEDTWTRPGGGGGISRVLQDGAVWEKAGVNVSVVYGEMPPEAYRSATGDDHRKPGPVPFFAAGISSVLHPKNPFAPTMHFNFRYFETDTSAVDVAGAPRKWWFGGGTDLTPAYLFEEDARHFHRIQKNACDKYNPMFYPKFKKWCDEYFYIKHRGERRGVGGIFFDDLNEYDQEMLLSFATECANSVVPSYIPIIEKRKDMSFNEKHKAWQQLRRGRYVEFNLVYDRGTTFGLQTGGRVESILVSMPLTARWEYDHQPELGTEEWKLLDACINPKEWC*

Click here to download the sequence:
Link to NCBI Protein BLAST