Transcript Information: R_Transcript_222939.p1


Annotated TAIR IDAT1G74350.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27949022-27951283 | Reverse length=753
E-Value1.9E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2959382627297
Replicate 20.60639134776312
Replicate 30.71669696450056
Condition 2: 8 Hour
Replicate 10.50091420469695
Replicate 20.61889323988841
Replicate 31.2450563241421
Condition 3: 24 Hour
Replicate 11.5747232394454
Replicate 20.82275935692888
Replicate 31.237932756058


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_222939.p1 GENE.R_Transcript_222939~~R_Transcript_222939.p1 ORF type:complete len:831 (+),score=156.38,RVT_1|PF00078.23|3.8e-09,Intron_maturas2|PF01348.17|3.4e-08 R_Transcript_222939:137-2629(+)
ATGTGGCTCTCAAATGTTCCCAAACGTACCTTCATCCTTGCATTTGGTAACTTCCCACTTACAAACATGTTTTCCACAACTACCCCTTTTCCTGCCACTCCAAGAATTTACATAGGTAAAGCTCAAACATCTTCTGTAGGTTGTTGTTATTCAACCCTTCAAAGGACCAACCATGAGAATGTGAATGCGAATGACAGTAATGTGGATGATGATAATGATTATGATGACGGGAAAGTTCCATTAGCGAAGAGCTTAGCATCACTTGTAGTTGAGTCTTCATCTTATAAAGATGACTATGTTAAGGAGGGTAGTAAGCTTCAAACTAGTAGAGTTGCTATGAAAAGGGTGCTTGGAGCACGAGTGAAGAAGAGGGTGAAGTTTCAATATGCAAATGGGAAGTTCTGCGATCTTTTGCAAAAGGTTGTTGCTGATCCTAAGACACTTATGGATGCTTATAATTGTATTAGAGTGGACTCAAATGTCGACATAAAATCGTCTTCTGAGATTGAGGGTGTTTGTCTAGACTCCTTGGTGGAAGAGCTTGTTGAGGGGACATTTAATGTGAAGGCTAATATTTTCTCTGTCTCAACAAAGGGTCGTGCTCCAAAAGAAGTCCTTGTACTTCCTAACCTGAAATTGAAGATCGTTCAAGAAGCTATAAGGATGGTTTTGGAGGTTGTCTTTAGGCCTCACTTCTCGAAAATTTCTCATGGTGGTCGAAGTGGAAGAGGGCGTTTATCTGCTTGCAAGTATATATGCAAAGAGGTCTCTGATCCCAATTGGTGGTTCACTGTGCTTGTAAACAAGAAGATTGATGCCAGAGTTATTGCTAAACTGATTGCTTCCATAGAGGATAAGATTCAGGATCCTCAATTATGTGCGATGATTGAAAGCATGTGTAGTGAGCAGGTGCTCAATCTAGAATTTGGGGGCTTCCCAAAAGGCCAGGGCCTCCCACAAGAAGGTGTTTTATCGCCTATATTGATGAATATTTATCTTGACCACTTTGACAAAGAGTTCCATAAAATATCGATGAGATATGAGGCCCTTGGTTCACACAGTGAGCCTGATGAATGCCGGTCTCAATCACAGCTGCGGAACTGGTTCAGGAGGCAAATAAAAGGCAGTGCTGATAACTCCACAAGTTGTGAGATTCATGGTTTGAGAGTTTATTCTTGTCGCTTCATGGATGAGATATTTTTTGCTGTTACTGGTTCCAAAGAGGCTGCACTTTCATTAAAGACTGAGGTTCAATGTTACTTGCAAGATTCTCTTCATTTGCATGTTGACTGCGACACGGAGATCATACCATGTAATAGCCAACATCCCGTCCGTTTTGCTGGTGCGTTAATTGTGAGAACCATTAGAGATACTATGGCAGTAAGAACTGTTCACAAGTTGAAGGACAAGGTCAAGTTATTTGCCTTACAAAAGCAAGGAATTTGGGATGCTGGGACAGCTAGTATAGGTAAGAAGTGGTTAGCTCATGGTTTACGGAAGGTTAAGGAGTCAGAGATAAGACATCTAGCTGATAATAACCCTCTTTTGAGCAAAATCTCCCACTATCGTAAAACTGGCATGGAAACAGATCACTGGTACAAGCACTTACTGAAGATATGGATGCAGGATGTAAATGCTAATTCTGCAAGCAATGAAGAATTTATCCTCTCTAGGTTCATTGCTGAACCTGCACTTCCACAAAGTTTACGGGACTCATATTATGAGTTTCAGAGACATGCAGAAGAATACACTTCTTCTGAGTCGGAATCTCTTCTTTCTCTTTTGCCAAGCTCTGGGATGCCTCCGAAACTTCAGACTGTCACAAAGGTTGTAGCTCCTGTTAATGTTGTAAAGAAGCGCCTTGTGCGTTATGGATTGGTCAATCATGAAGGTTGTGCCTGTGCAGTTTCTGTTCTCATTTTTCAGGATAGCAGCCAGATCATTGACTGGTTTTCTGGCATTGTACATAGATGGCTGCGATGGTATAGTGACTGTCATAACTTCGATGAGCTAAAACTCCTTGTTTCAGATCAAGTCAGGAAGTCTTGCATCTGTACTCTTGCATTAAAGTATAGGATTCATGAGTTTGAGATTGAGAAACGTTTTGAGTCAGAGCTAAGCAAGATCCCTTGTTCCCTGGACATAGTGCATGAAATTGACAAAGAGACACTGGGTTCTTGTGGTCATGATAAAGATGAGGGAATGATGTATGGAATATCATACAATGGGTTGTGTCAACTGTCCCTTGCTAGGATTGTGAGCCAGTCGAGGCCCTGTAATTGTTTTGTTCTGGGCTGCTCAACTCCAGCACCATGTGTTTACACCCTTCATTTGATGGAACGACAGAAGTTTCCGGGTTGGAACACAGGTTTCTCAAGTTGCGTCCATCCTGGTTTGAATAGAAGACGAATTGGCTTGTGTAAACAGCATCTGAAGGACCTCTATCTTGGCGAGATATCACTTCAATCTATAGATTTTGATTCCTGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_222939.p1 GENE.R_Transcript_222939~~R_Transcript_222939.p1 ORF type:complete len:831 (+),score=156.38,RVT_1|PF00078.23|3.8e-09,Intron_maturas2|PF01348.17|3.4e-08 R_Transcript_222939:137-2629(+)
MWLSNVPKRTFILAFGNFPLTNMFSTTTPFPATPRIYIGKAQTSSVGCCYSTLQRTNHENVNANDSNVDDDNDYDDGKVPLAKSLASLVVESSSYKDDYVKEGSKLQTSRVAMKRVLGARVKKRVKFQYANGKFCDLLQKVVADPKTLMDAYNCIRVDSNVDIKSSSEIEGVCLDSLVEELVEGTFNVKANIFSVSTKGRAPKEVLVLPNLKLKIVQEAIRMVLEVVFRPHFSKISHGGRSGRGRLSACKYICKEVSDPNWWFTVLVNKKIDARVIAKLIASIEDKIQDPQLCAMIESMCSEQVLNLEFGGFPKGQGLPQEGVLSPILMNIYLDHFDKEFHKISMRYEALGSHSEPDECRSQSQLRNWFRRQIKGSADNSTSCEIHGLRVYSCRFMDEIFFAVTGSKEAALSLKTEVQCYLQDSLHLHVDCDTEIIPCNSQHPVRFAGALIVRTIRDTMAVRTVHKLKDKVKLFALQKQGIWDAGTASIGKKWLAHGLRKVKESEIRHLADNNPLLSKISHYRKTGMETDHWYKHLLKIWMQDVNANSASNEEFILSRFIAEPALPQSLRDSYYEFQRHAEEYTSSESESLLSLLPSSGMPPKLQTVTKVVAPVNVVKKRLVRYGLVNHEGCACAVSVLIFQDSSQIIDWFSGIVHRWLRWYSDCHNFDELKLLVSDQVRKSCICTLALKYRIHEFEIEKRFESELSKIPCSLDIVHEIDKETLGSCGHDKDEGMMYGISYNGLCQLSLARIVSQSRPCNCFVLGCSTPAPCVYTLHLMERQKFPGWNTGFSSCVHPGLNRRRIGLCKQHLKDLYLGEISLQSIDFDSWK*

Click here to download the sequence:
Link to NCBI Protein BLAST