Transcript Information: R_Transcript_223008.p1


Annotated TAIR IDAT1G80450.1
Annotated Gene NameVQ motif-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30244155-30244688 | Reverse length=177
E-Value9.8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.3997533610865
Replicate 30.27765742540791
Condition 2: 8 Hour
Replicate 11.0387942704892
Replicate 21.2196844640647
Replicate 30.55004880667839
Condition 3: 24 Hour
Replicate 10.69569112811225
Replicate 20.53467294280187
Replicate 30.3979582670345


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_223008.p1 GENE.R_Transcript_223008~~R_Transcript_223008.p1 ORF type:complete len:165 (+),score=30.21,VQ|PF05678.10|1.7e-13 R_Transcript_223008:58-495(+)
ATGGCTTCAAACTCCAACTCCTCCAACACAACCTTCGTTGAAGCCGATCCCTCGAACTTCCGAGCCGTTGTACAGCGGCTCACGGGCTCCTCCGCCGCTTCAACCGCGGCGGAGGTGGGTGGGTTCAAGCTGCATGAAAGAAGGCAAGTAGCTGCTATGAGTAGCATGAGGAAGTTGGAGATGATCAAGCTTAACAACTATATTGGGCTCTCAAGTGGGCTGGCTATGGCTTCTCCGGTTTCAACTTTGGATGGGCTGGGGCTTGGGCTTTCTAGCCCAAGAACACCCACTGTGAGTGAAGAAGAAGAGAGAGCTATTATTGCAGAGAAAGGGTTTTATTTGCATCCTGTTAGTCCTTTGAGCACTCCTAGAGATTGTGAGCCTCAGCTCTTGCCTTTGTTCCCTCTTCATTCTCCTAGGGATCTTCATCAACCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_223008.p1 GENE.R_Transcript_223008~~R_Transcript_223008.p1 ORF type:complete len:165 (+),score=30.21,VQ|PF05678.10|1.7e-13 R_Transcript_223008:58-495(+)
MASNSNSSNTTFVEADPSNFRAVVQRLTGSSAASTAAEVGGFKLHERRQVAAMSSMRKLEMIKLNNYIGLSSGLAMASPVSTLDGLGLGLSSPRTPTVSEEEERAIIAEKGFYLHPVSPLSTPRDCEPQLLPLFPLHSPRDLHQP*

Click here to download the sequence:
Link to NCBI Protein BLAST