Transcript Information: R_Transcript_223107.p2


Annotated TAIR IDAT5G46020.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18663075-18664629 | Reverse length=164
E-Value1E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1256.43730421047
Replicate 2293.69058251018
Replicate 3296.38226742506
Condition 2: 8 Hour
Replicate 1237.9485280763
Replicate 2245.00941698379
Replicate 3229.06664445482
Condition 3: 24 Hour
Replicate 1263.94436039704
Replicate 2246.93771457241
Replicate 3225.05394512417


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_223107.p2 GENE.R_Transcript_223107~~R_Transcript_223107.p2 ORF type:complete len:163 (+),score=71.31,PP28|PF10252.5|1.3e+03,PP28|PF10252.5|6.6e-28 R_Transcript_223107:221-709(+)
ATGGGGAGAGGAAAGTTCAAGAGCAAGCCTACTGGTCGCCGTCAATTCTCCACCCCTGATGAGATCTTAGGTGGGCCTTCTCGTCCTCGTACCTTTAGGAAGAAAGAAGCTGAAGAGGAAGAGGAAGAAGAGATAGAGGAGGAGGAAGAAGGATCCGAAGAAGAGTCTGATGATGAGCAGCAAAAGCGGAAAGGGACACAGGGTATTATTGAGATTGAAAACCCCAATTTAGTGAAGGCAAAGAATGTAAAGGCTAAAGATATTGATCTTGAGAAAACAACAGAGCTTTCAAGACGTGAAAGGGAGGAGTTGGAGAAACAGAGAGCCCATGAAAGATACATGAGGTTACAAGAGCAGGGGAAAACAGAACAAGCAAGAAAAGACTTGGAGAGGTTAAAACTTATCCGTGAACAAAGGGCAGAAGCTGCTAGGAAGAGAGAGGAGGAGAAAGCTGCCAAGGAGCTGAAGAAAGCTGAAGCTCGCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_223107.p2 GENE.R_Transcript_223107~~R_Transcript_223107.p2 ORF type:complete len:163 (+),score=71.31,PP28|PF10252.5|1.3e+03,PP28|PF10252.5|6.6e-28 R_Transcript_223107:221-709(+)
MGRGKFKSKPTGRRQFSTPDEILGGPSRPRTFRKKEAEEEEEEEIEEEEEGSEEESDDEQQKRKGTQGIIEIENPNLVKAKNVKAKDIDLEKTTELSRREREELEKQRAHERYMRLQEQGKTEQARKDLERLKLIREQRAEAARKREEEKAAKELKKAEARK*

Click here to download the sequence:
Link to NCBI Protein BLAST