Transcript Information: R_Transcript_22344.p1


Annotated TAIR IDAT2G16940.2
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7342869-7347052 | Reverse length=610
E-Value9E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.180524701505
Replicate 26.3876068872118
Replicate 310.453215466413
Condition 2: 8 Hour
Replicate 110.070243048726
Replicate 26.9287239507899
Replicate 312.015854917721
Condition 3: 24 Hour
Replicate 112.675296384873
Replicate 29.8161433935527
Replicate 313.255933824459


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22344.p1 GENE.R_Transcript_22344~~R_Transcript_22344.p1 ORF type:complete len:355 (+),score=67.70 R_Transcript_22344:107-1171(+)
ATGGATTTTGATGAGTATGAATACTTGGAAAAGACTGTTGAAAATCCCGAGCCCCAGAAATCGAAGGAAGATGCCAATGGTGGGGACGCACCTCTCAAGTCAGGGGAAAAGTATAGAAGCCGAAGTTCTCGGCATAGGGGTGAGGATGATGATGTCGATCGAAAACCCAAGCGTTCCAGATCTGGGGATGATCTGCTTGATCATGATCGACATAGAGATAAGGGTTCTTCTCGGCACCGATCACGGTCCAGAGAAGGAGAAAGGAGTGATAGAGATGGGGAAAGGCATAAAAGTAGCAGAGAAAGAGAACATAGAGATAAGTATAGAGAAAGAGAGGAGAGGAATGGGAGGGACCGTGATCGGGAACGGGAACGGGAACGTGATCGTGAAAGGAAAGAACGTGACCATGAGAAGGAAGTCGAGATCAACAGGAATGAACGCGAACACCGTAGCAGGAGTTGTTCAGATAGACATTGGGATGATAGGGAGAGGAGTCAAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTAAGGGAGATGAGCCGGGAAAGGGAATACAGAGAAAGGAGTCGGGATAGGGAGCGCAGAGAAAGGAGTCGAGACATTGAGCCACGTGACAAAGAAAGCCGATATGCTAGAGCAATCTTCAGATGGTCATTCTGGCAAATGAGCCAGGCTCTGGAAACAGGTTATGGGTTTAATATATCCTTCCTAGACCCCTGGGCATTTGTGAGACGTCTTGCCGTTGGGATTTCAAAATTGGACGTTATTGGGGGGAGATGCCGTGTTACAATTTTCTTATCATCCCCTCTCTCAACACAGTCGTTTAATTACATTTATTGTGTTGCAGACATGCTGGTAAGAGAGTCTCAGGCTTTGCTTAGAAGAAGCACTTCATCTTCTGAATCTTGTGAGATTAGCAGTGTCCATTTGGCTAAGAGGATGGTCAAAGTCAAAACCATTTTGCAGGGCTATAATCTCATAACAAGCTGTTTAATGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22344.p1 GENE.R_Transcript_22344~~R_Transcript_22344.p1 ORF type:complete len:355 (+),score=67.70 R_Transcript_22344:107-1171(+)
MDFDEYEYLEKTVENPEPQKSKEDANGGDAPLKSGEKYRSRSSRHRGEDDDVDRKPKRSRSGDDLLDHDRHRDKGSSRHRSRSREGERSDRDGERHKSSREREHRDKYREREERNGRDRDRERERERDRERKERDHEKEVEINRNEREHRSRSCSDRHWDDRERSQDREVRGKSRDREVRGKSRDREVRGKSRDREVREMSREREYRERSRDRERRERSRDIEPRDKESRYARAIFRWSFWQMSQALETGYGFNISFLDPWAFVRRLAVGISKLDVIGGRCRVTIFLSSPLSTQSFNYIYCVADMLVRESQALLRRSTSSSESCEISSVHLAKRMVKVKTILQGYNLITSCLMS*

Click here to download the sequence:
Link to NCBI Protein BLAST