Transcript Information: R_Transcript_223501.p1


Annotated TAIR IDAT3G05980.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1795514-1796251 | Forward length=245
E-Value9E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.195149385561
Replicate 212.45780491367
Replicate 310.231676126281
Condition 2: 8 Hour
Replicate 112.242932473623
Replicate 29.8387880101217
Replicate 39.801869735009
Condition 3: 24 Hour
Replicate 117.60098554124
Replicate 219.408627823708
Replicate 313.716294937122


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_223501.p1 GENE.R_Transcript_223501~~R_Transcript_223501.p1 ORF type:5prime_partial len:150 (-),score=38.12 R_Transcript_223501:407-856(-)
GGAAAAGATCATCCCCAGCAGATTTCCCACATTGGGAATGGGAATGGGATACTTTTGGGCAGGGAACAACAGGAACCAAGGATATGGTTTGTAGATGATGACCCATCACCAAGGCCGCCGAAATGCACGGTTCTGTGGAAGGAGTTGCTGAGGCTGAAGAAGCACAGGAACTCGACACTGTCACCGTCGTCGTCGTCGTCGAGCTCCAGCTCCAGCTCCAGCTCGTTAGGGGATGCGGCGGCGGCGGTGGAGGAGAGAGATAAAGATCAGAAGGAGATGAGTAGCAGAGAGAAGCATATTAAGAGGATTAAAAAGGGTTTGGAGAGAACAAGATCAGCTAGTATAAGGATTAGGCCTATGGTTAATGTCCCCATTTGTCAAACTACTGCTAAGTCCAGTTCTTTGCCTCCCCTGTTTCCACTCAAGAAAGGCCATAAGCTTGATAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_223501.p1 GENE.R_Transcript_223501~~R_Transcript_223501.p1 ORF type:5prime_partial len:150 (-),score=38.12 R_Transcript_223501:407-856(-)
GKDHPQQISHIGNGNGILLGREQQEPRIWFVDDDPSPRPPKCTVLWKELLRLKKHRNSTLSPSSSSSSSSSSSSSLGDAAAAVEERDKDQKEMSSREKHIKRIKKGLERTRSASIRIRPMVNVPICQTTAKSSSLPPLFPLKKGHKLDR*

Click here to download the sequence:
Link to NCBI Protein BLAST