Transcript Information: R_Transcript_223502.p1


Annotated TAIR IDAT3G05980.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1795514-1796251 | Forward length=245
E-Value8.3E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5809651220623
Replicate 21.5705894012191
Replicate 32.4349681696697
Condition 2: 8 Hour
Replicate 12.9884323360811
Replicate 21.672664389695
Replicate 31.4292606787706
Condition 3: 24 Hour
Replicate 13.9769429843267
Replicate 24.081091212036
Replicate 33.5330546935543


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_223502.p1 GENE.R_Transcript_223502~~R_Transcript_223502.p1 ORF type:complete len:254 (-),score=45.36 R_Transcript_223502:178-939(-)
ATGGTATCCCCAGAAAGAGCAGAAACAACAACGGCTAGCCCAAGAATATCATTCTCAGCGGATTTTCTCGACGATGAGAGCTTCATTTCCATCAGCCCCAGCTCATCTTTCGACAATGACGAGATCGAACGAGACCCGAAAGATCATCAGTTCGAGTTCCTGTCAACCAAGAACAGCATTGATGGAACAGAGTCAAATATGCTGACTGCCGACGAGCTCTTCTTCGAGGGCAAGCTCCTTCCGTATTGGCAAATGCACCATGCAGCCGACAAGCTCAACAACGTCAACCTCAAATCCCAAACAGACGCCGCCGCCGCCGCCAATGGCAAAGATCATCCCCAGCAGGTTTCCCGCATTGGGAATGGGATACTTTTAGGCAGGGAACAACAGGAACCAAGGATATGGTTTGTAGATGATGACCCATCACCAAGGCCGCCGAAATGCACGGTTCTATGGAAAGAGCTGCTGAGGCCAAAGAAGCACAGGAACTCGACGCTGTCGCCCTCGTCGTCGTCGTCGAGCTCCAGCTCGTTAGGGGATGCTGCGGCGGCAGCCTCGGTGGAGGAGAGAGAAAAAGATCAGAAGGAGATGAGTAGCAGAGAGAAGCATATTAAGAGGATTAAAAAGGGTTTGGAGAGAACAAGATCAGCTAGTATAAGGATTAGGCCTATGGTTAATGTCCCCATTTGTCAAACTACTGCTAAGTCCAGTTCTTTGCCTCCCCTGTTTCCTCTCAAGAAAAACAATAAGCTTGATAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_223502.p1 GENE.R_Transcript_223502~~R_Transcript_223502.p1 ORF type:complete len:254 (-),score=45.36 R_Transcript_223502:178-939(-)
MVSPERAETTTASPRISFSADFLDDESFISISPSSSFDNDEIERDPKDHQFEFLSTKNSIDGTESNMLTADELFFEGKLLPYWQMHHAADKLNNVNLKSQTDAAAAANGKDHPQQVSRIGNGILLGREQQEPRIWFVDDDPSPRPPKCTVLWKELLRPKKHRNSTLSPSSSSSSSSSLGDAAAAASVEEREKDQKEMSSREKHIKRIKKGLERTRSASIRIRPMVNVPICQTTAKSSSLPPLFPLKKNNKLDR*

Click here to download the sequence:
Link to NCBI Protein BLAST