Transcript Information: R_Transcript_22366.p1


Annotated TAIR IDAT4G19490.1
Annotated Gene NameVPS54
Annotated Gene Symbol(s)ATVPS54, VPS54
Annotation TypeHomolog
Chromosome Positionchr4:10616017-10622934 | Forward length=1034
E-Value2E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2299838918274
Replicate 20.2829690083059
Replicate 30.98789164835159
Condition 2: 8 Hour
Replicate 10.39599781585841
Replicate 21.0848945367691
Replicate 31.9570469671576
Condition 3: 24 Hour
Replicate 11.3613794043383
Replicate 21.0106183319133
Replicate 31.0029406460303


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22366.p1 GENE.R_Transcript_22366~~R_Transcript_22366.p1 ORF type:5prime_partial len:371 (+),score=92.90 R_Transcript_22366:1-1113(+)
CTGGAGTCGGATTTCTCGACAGGAGAGAGGACCAGTGATGCAGATGGTGGAGGCTTGTCTCTTGCAAGCAGGCTGAGGAATTTACCATCTGAAAGCTTCGTTCAATTATTAGCTGCTATTTTCAAGATTGTCCTGGCTCATTTAGTTCGGGCAGCTGAAATCAAAAAGTCCATTGAGTGGATCATGTCTAATCTGGATGGTCATTATGCAGCTGATTCAGTTGCTGCTGCCATTGCACATGGTGCTGCAGCTGCAGAAACTGTTCAAGATAGTGATAGTCAAGGCAACTATGTGGTTGCACATTCTCCACAAAGGATTATTGCCAAATCTCCTTCTTTCCAAGGGAAGGCAAATGAAGCAACAAGTCCTTCAAATATGTCAAAAAATTTCCGCGCTGATGTGTTACGAGAAAACGCTGAAGCTGTCTTTGCAGCTTGTGATGCTGCCCATGGGAGGTGGGCAAAACTTCTTAGTGTTCGTGCTCTTCTTCATCCCAAGTTAAGGTTACAGGAGTTTCTAAGCATTTACAGCATCAGTCAAGATTTTATAAATGTTACTCAAAAGACTGGTGGAAGGTTGGGATTTAGTATACGGGGTACACTGCAGTCACAAGCCAAAGCCTTTGTGGATTACCAGCATGAGTCGCGTGTGACAAAAATTAAGGCAGTGTTAGATCAAGAAACCTGGTCAGAAGTTGATGTTCCGGATGAGTTTCAGGCCATTGTTGCTTCAATGCTTACTTCTGATCCTCTGGTTGCTGGGAACTCTGAGGTTTCTCAGGGTGGTGAAGTAATATCAAGAAATGGAGAGGCCGCTGTGGCGGATATCAAAGAAGCGAATTGTGAGCATTCTGCAGGGCAAACTGATTCCAGCAACAGTTCTAATGATACTGCCAACCAAGAGATATCTCAACATTCAGGTCAGGCAACTAACATTAATAAAGTTGATGTTGCTACTTCAACCAACAGCAAAAACAGCAGCATAAAAGATCGGGGAAAGACAGCTTCTCAAACTCTCATGCATAGAGGGGTTAACTATCACATGGTTAACTGGTTAGTTACTCTGATTTCTCATTGTCATTTCTGTTTCTGCTGTAACCAAATCTATGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22366.p1 GENE.R_Transcript_22366~~R_Transcript_22366.p1 ORF type:5prime_partial len:371 (+),score=92.90 R_Transcript_22366:1-1113(+)
LESDFSTGERTSDADGGGLSLASRLRNLPSESFVQLLAAIFKIVLAHLVRAAEIKKSIEWIMSNLDGHYAADSVAAAIAHGAAAAETVQDSDSQGNYVVAHSPQRIIAKSPSFQGKANEATSPSNMSKNFRADVLRENAEAVFAACDAAHGRWAKLLSVRALLHPKLRLQEFLSIYSISQDFINVTQKTGGRLGFSIRGTLQSQAKAFVDYQHESRVTKIKAVLDQETWSEVDVPDEFQAIVASMLTSDPLVAGNSEVSQGGEVISRNGEAAVADIKEANCEHSAGQTDSSNSSNDTANQEISQHSGQATNINKVDVATSTNSKNSSIKDRGKTASQTLMHRGVNYHMVNWLVTLISHCHFCFCCNQIYV*

Click here to download the sequence:
Link to NCBI Protein BLAST