Transcript Information: R_Transcript_223681.p2


Annotated TAIR IDAT5G09950.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3102877-3105864 | Reverse length=995
E-Value8E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30523346078125
Replicate 20
Replicate 30.076611162528938
Condition 2: 8 Hour
Replicate 10.3275700996287
Replicate 20.14957111599455
Replicate 30.72849273392857
Condition 3: 24 Hour
Replicate 10.61425571177804
Replicate 20.59010726128635
Replicate 30.51242117996081


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_223681.p2 GENE.R_Transcript_223681~~R_Transcript_223681.p2 ORF type:5prime_partial len:299 (+),score=46.45,PPR_2|PF13041.2|4.1e+02,PPR_2|PF13041.2|8.7e-08,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|9.6e-06,PPR|PF01535.16|70,PPR|PF01535.16|6.5e-05,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.0058,PPR|PF01535.16|0.0009,PPR|PF01535.16|2.2e+02,PPR_1|PF12854.3|0.007,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|6.4e+02,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|98,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|1.5,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.00058,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|1.1e+03 R_Transcript_223681:3-899(+)
CTTTTGTATGCTAGAATTGGTGTGATGTTGTTGGCACACAAGGTGTTCGATGAAATCCCTGAGAGAAATCTGGTCACTTGGGCGTGTTTGATTTCAGGTTGTGTACAAAATGGCATGCTCAACAAGGCATGTTTTCTATTCAAGGGCCTTGTTTCTGCTGGCTTTGTACCCAATCACTATGCATTCGGAAGCGTCCTTCGTGCTTGCCAAGAGTTGGGACCAGATAGTCTTAAGTTTGGTATGCAAATTCATGGCATGGTATCAAAGACTGTGTTTTCAGATGATGTGTTTGTAACTAATGTGTTGATATCGATGTATCGAAGCTGTTGTTTGGAGTCTTTGAGCTCTGCTAGGAGAGTGTTTGATGAGATACATGATAGGAATTCAGTATCATGGAACTCTATTATCTCAGCGTATTGCCAAAGAGGCGATCCTGTTTCCGCTTGTATGCTGTTCTTGGAGATGCAAAATGAAGCTATGAGTTTCGATGTGAAGCCTAATGAATATACATTGTGTAGCATAATTAGTGCTGCAGCTACCTCTCCAGATTTGGGTTTGTGTTTACTTGAGCAGATGCTTACATGGGTGCAGAAATCTGGATTTATAGGAGATTTGTATGTAGGAAGTGCTTTGGTTAGTGGGTTTGCGAAGTTTGGATTGATTGATGCTGCAAGGAAGATTTTCGAGCAGATGGGCACTCAGAATGCTGTCACCTTGAATGGACTGATGGTGGGATTAGTGCAGCGAAAGAGAGGAGAAAAAGCAGTGGACGTATTTAAAGAAATGAGACATTTGGTTGAAATCAATCCCGACTCTTATGTGGTCCTATTAAGCGCTTTTGCCGAATTTGACTTGCTAGAAGAAGGTAGGGGAAAAGGTAAAGAACTTCATGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_223681.p2 GENE.R_Transcript_223681~~R_Transcript_223681.p2 ORF type:5prime_partial len:299 (+),score=46.45,PPR_2|PF13041.2|4.1e+02,PPR_2|PF13041.2|8.7e-08,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|9.6e-06,PPR|PF01535.16|70,PPR|PF01535.16|6.5e-05,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.0058,PPR|PF01535.16|0.0009,PPR|PF01535.16|2.2e+02,PPR_1|PF12854.3|0.007,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|6.4e+02,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|98,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|1.5,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.00058,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|1.1e+03 R_Transcript_223681:3-899(+)
LLYARIGVMLLAHKVFDEIPERNLVTWACLISGCVQNGMLNKACFLFKGLVSAGFVPNHYAFGSVLRACQELGPDSLKFGMQIHGMVSKTVFSDDVFVTNVLISMYRSCCLESLSSARRVFDEIHDRNSVSWNSIISAYCQRGDPVSACMLFLEMQNEAMSFDVKPNEYTLCSIISAAATSPDLGLCLLEQMLTWVQKSGFIGDLYVGSALVSGFAKFGLIDAARKIFEQMGTQNAVTLNGLMVGLVQRKRGEKAVDVFKEMRHLVEINPDSYVVLLSAFAEFDLLEEGRGKGKELHA*

Click here to download the sequence:
Link to NCBI Protein BLAST