Transcript Information: R_Transcript_223740.p1


Annotated TAIR IDAT1G60720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22357072-22357941 | Forward length=289
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64612251167146
Replicate 20.92903984142912
Replicate 30.60814347600405
Condition 2: 8 Hour
Replicate 10.86675628131841
Replicate 21.3851873706929
Replicate 30.80316861152155
Condition 3: 24 Hour
Replicate 11.2189986138604
Replicate 20.390358564435
Replicate 31.1621790099237


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_223740.p1 GENE.R_Transcript_223740~~R_Transcript_223740.p1 ORF type:complete len:113 (+),score=17.06,zf-RVT|PF13966.2|4.1e-07,zf-RVT|PF13966.2|1.3e+03 R_Transcript_223740:2478-2816(+)
ATGACAAGAGCAAGGCTAAAACGCCTTGGAATTCTGGATGATGATAGGTGTGGCTTGTGTGGAAATGAGGAGGAGAATTGCAAGCATTTGTTTATTGCTCGTGTTTTTCGGAAGCAGGTTTGGCAGGGGTTGCTGTCCTGGCTTCATCTCTCACGAAGTTCACTCAGCTTCTGGAATGAGATGAAATGGTTTATGAGAAAGTCCGGTAAGAAGAAGATTAGCTACCAGATAAAGGGTGCAACACTCATCACAACAATATATGAAATCTGGATGGAAAGAAATCTTAGGGTATTTACACAAAGGAGATGTGATCCCCAAATGTTGTTCAAGCACATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_223740.p1 GENE.R_Transcript_223740~~R_Transcript_223740.p1 ORF type:complete len:113 (+),score=17.06,zf-RVT|PF13966.2|4.1e-07,zf-RVT|PF13966.2|1.3e+03 R_Transcript_223740:2478-2816(+)
MTRARLKRLGILDDDRCGLCGNEEENCKHLFIARVFRKQVWQGLLSWLHLSRSSLSFWNEMKWFMRKSGKKKISYQIKGATLITTIYEIWMERNLRVFTQRRCDPQMLFKHI*

Click here to download the sequence:
Link to NCBI Protein BLAST