Transcript Information: R_Transcript_224123.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73194830896115
Replicate 20.49991191467376
Replicate 30.7463348088972
Condition 2: 8 Hour
Replicate 10.33752445416002
Replicate 20.7565711901153
Replicate 30.56865948058856
Condition 3: 24 Hour
Replicate 10.7192295497401
Replicate 20.4974870426446
Replicate 30.87770244358486


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_224123.p1 GENE.R_Transcript_224123~~R_Transcript_224123.p1 ORF type:complete len:798 (-),score=128.38,RVT_1|PF00078.23|1.4e-16,RVT_1|PF00078.23|8.9e+02,rve|PF00665.22|3.4e-10,Chromo|PF00385.20|1.9e-08 R_Transcript_224123:642-3035(-)
ATGTGTTCAAGACAGCTTTCAAGACTCAACTTTGAGTTTCTAGTTATGCCTTTTGGCCTAACTAATGCCCCTGCCACATTTCAAGGGTTTATGAATCATGTTTTTAAATCCTATCTGCGAAAATTTGTTTTAGTTTTTTTTGATGATATATTGGTTTACAGCCCTTCCCTTGATCTTCATATTCACCATCTCACTCTTGTATTTTCTGTGATGAGGAAACACCAATTATTTGCCAAGCTTAGCAAGTGTTTCTTTGGAAGAGACAAAGTGGAATACCTTGGCCATTACATTTCAGCACAAGGAGTTCAAACTGATCCTCAGAAAATCCACAGCATTGTTTCTTGGCCCCAACCCAAGAATGTCAAACAACTCCGGAGTTTCCTTGGCATGGCAGGGTACTACAGAAAATTCATCAAGAACTATGCTCTCATTTCCCAACCTCTCAATAATCTACTGAAGAAAGGGGACTTCCAATGGTCAGCAAAGGCTCAACACTCCTTTGATTGTTTGAAAACTGCCTTAACTTCAGCTCCAGTTTTGGCATTACCAGACTTCAAGAAGCAGTTTATTGTGGAGACAGATGCTTCTCAGTGTGGCATTGGTGCTGTTTTGATGCAGGATGACCATCCATTGGCTTACATTAGCAGAGTTTTGGGTCCTAAAGGGCAATCACTATCAGTTTATGAGAGAGAATTGTTGGCATTAGTCTTTGCAGTCCAGAAATGGGAACAATACCTATTTGGACAGCAGTTCATTATCCGGACTGATCAGAAGAGCCTCAAGTGGCTCCTACAGCAAAAGGTGACTACTCCATTTCAGCAATTTTGGTTATCAAAGCTCATGGGATATACCTATGAAATTCAGTACAAAAAGGGGCAAGATAATAAGGTGGCAGATGCTTTATCTCGAATGGATGGTGCTGAAATTCTAAGTATGGCCCTATCCACTATTAATTCTGCTCTTCAGGACAAAATCACAGCTAGCTGCCTATTAGACCCTCATTACTCACAACTATTACAACAACTTCAGCAAGGGGTGGATGGAGGTCACTTCTCTTTGATTGGAGGTTTACTCAGAAAGAAAGGAAGGTTGGTCATAGGGTCTGATGCAGAGTTGAAACAACAATTGCTCTTTTGGGCTCATGACTCACCTATGGGGGGACATTCTGGTAGAGATGCTACATTAAAAAAATTAAAGAACCTTTTCTATTGGAGGGGTTTGACTAAGGACGTCACTGCCTATATCAGGAATTGTGTCATATGTCAAGCATGTAAATATGATCAAGCTGCCTCCCCTGGGCTTCTCCAACCACTACCAATTCCCGAGGAAGTGTGGATTGACATTTCTATGGATTTTGTAGAGGGCTTACCCAAATCACAGGGCTTTGAAGTTATCTTTGTGGTGGTTGATAGATTGAGCAAATATGCCCACTTTATTCCCCTTAAACACCCCTATACAGCTGAGGAAGTAGCTCAACAATATCTTAATCATGTCTTTAAATTGCATGGTTGGCCTCGAAGCATAGTGAGTGACAGGGATGCCATATTCCTTAGTCAATTTTGGAGGGCTTTATTCACTATTCAGGGTGTGGATCTGTTATTGTCCTCAAGTTACCATCCTCAAACAGATGGCCGGACTGAGATAGTCAACAAGTGTTTAGAGAGCTATTTGAGATGCATGTGTGGGGAGCAGCCTACTGATTGGAGTAAATGGTTACCATTGGCTGAATGGTGGTATGATACCACTTTCCATTCAGCTACTCAACTTACTCCATATGAAGTGGTGTATAATCAACCACCTCCATTGCATTTACCATATATCCCTGGTGAATCTAAAGTGAATGCAGTAGATCGGACACTTCAGAGAAGAGAAAGTATGATCCACAGCCTCAAAACTAATCTGTTGAGAGCTCAAGCCAGAATGAAGTATTATGCTGATTCTCATCGATCTGAAAGAACTTTTGAAGTAGGGGAATGGGTATGGCTGAAGCTTCACCCTTATAGACAGCAGTCAGTAGAGCGGAGAGCTAGTCATAAGTTGAGTAAGAAGTATTATGGTCCCTTTCAAATCATCAGGCGGATTGGCACAGTGGCCTATCAATTGTTGTTGCCCGATTATGCTCATATACATGATGTCTTCCATGTCTCATTGCTTAAAGGATTCAAAGGAGAACTTCCTGCTCACCCTTATATCCCAGACTGGATGCAAGGTACTAACACCAATGATTCCCTTTATCCACAAGCAATACTTAACAGAGGTATAGTTAAGCATCAAAATAGGGCTGCTGTCAAGTACTTGGTCCAATGGGAGAATCATAGTCCAGAAGAGGCAACATGGGAGTTTGCAGAGGACATGGAGGTCAGATACCCGGAATTTTTCTTGCCTGAGACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_224123.p1 GENE.R_Transcript_224123~~R_Transcript_224123.p1 ORF type:complete len:798 (-),score=128.38,RVT_1|PF00078.23|1.4e-16,RVT_1|PF00078.23|8.9e+02,rve|PF00665.22|3.4e-10,Chromo|PF00385.20|1.9e-08 R_Transcript_224123:642-3035(-)
MCSRQLSRLNFEFLVMPFGLTNAPATFQGFMNHVFKSYLRKFVLVFFDDILVYSPSLDLHIHHLTLVFSVMRKHQLFAKLSKCFFGRDKVEYLGHYISAQGVQTDPQKIHSIVSWPQPKNVKQLRSFLGMAGYYRKFIKNYALISQPLNNLLKKGDFQWSAKAQHSFDCLKTALTSAPVLALPDFKKQFIVETDASQCGIGAVLMQDDHPLAYISRVLGPKGQSLSVYERELLALVFAVQKWEQYLFGQQFIIRTDQKSLKWLLQQKVTTPFQQFWLSKLMGYTYEIQYKKGQDNKVADALSRMDGAEILSMALSTINSALQDKITASCLLDPHYSQLLQQLQQGVDGGHFSLIGGLLRKKGRLVIGSDAELKQQLLFWAHDSPMGGHSGRDATLKKLKNLFYWRGLTKDVTAYIRNCVICQACKYDQAASPGLLQPLPIPEEVWIDISMDFVEGLPKSQGFEVIFVVVDRLSKYAHFIPLKHPYTAEEVAQQYLNHVFKLHGWPRSIVSDRDAIFLSQFWRALFTIQGVDLLLSSSYHPQTDGRTEIVNKCLESYLRCMCGEQPTDWSKWLPLAEWWYDTTFHSATQLTPYEVVYNQPPPLHLPYIPGESKVNAVDRTLQRRESMIHSLKTNLLRAQARMKYYADSHRSERTFEVGEWVWLKLHPYRQQSVERRASHKLSKKYYGPFQIIRRIGTVAYQLLLPDYAHIHDVFHVSLLKGFKGELPAHPYIPDWMQGTNTNDSLYPQAILNRGIVKHQNRAAVKYLVQWENHSPEEATWEFAEDMEVRYPEFFLPET*

Click here to download the sequence:
Link to NCBI Protein BLAST