Transcript Information: R_Transcript_224123.p2


Annotated TAIR IDAT3G42723.1
Annotated Gene Nameaminoacyl-tRNA ligases;ATP binding;nucleotide binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:14838392-14841189 | Reverse length=818
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34626213193233
Replicate 20.085350814700399
Replicate 30.031038939832185
Condition 2: 8 Hour
Replicate 10.13271471516122
Replicate 20.030299297887785
Replicate 30.14757407008445
Condition 3: 24 Hour
Replicate 10.15554069937469
Replicate 20.059770349296957
Replicate 30.2965813643211


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_224123.p2 GENE.R_Transcript_224123~~R_Transcript_224123.p2 ORF type:complete len:738 (-),score=145.74,Retrotrans_gag|PF03732.13|1e+03,Retrotrans_gag|PF03732.13|1.2e-06 R_Transcript_224123:3001-5160(-)
ATGGTGAATACAAGAATGGAAGAGCAGATAAAGGAATTAGACCAGAAATTTGGAGAGAAATATGCTAACATTGAGCAGCAGCTGGCAAAATTAATGGAAATGGTATCCAATAAGACGCCAGATTCTTCCTCTTCAGATTCTGAGGTAAATACTCAACATACATCAAATAAACCTTTACATTTCTCTCCTAAGGTAGAATTTCCCCAATTTGAAGGCAAAGATACTAATATGTGGATATTGAAGTGCAATAGATATTTTGAATTGTGTAATATCCCTGAGGCTCAGAAAATTAATCTTGCATCAATACATATGGTGGGAAGAGCAGCTGTATGGTTTAGCAGCTATATCATGTCTAGGCCTCATATATCTTGGGGAGAATTCGTGATAGATGTGGGTATGAGGTTCAAAGATGATTCAGAAAGTAAGGTGGTGGAAAAATTTAATAAATTGCAACAATATGGAACTTTAGAGGACTATGTTGATCAGTTTGAAGGGCTTAAGGCTTTGATGTTGCAAAGAAACCCTCTCCTACCTGCCAATTACTTTCTTGACAGCTTCATTGCTGGCCTTAAACCAACTTTAAAACCATTTGTCATGGCTTTTAATCCAGCTACCTTAGCTGCAGCAGTTCATTATGCAAGATTGCAAGAAGAAGCAATAGCTTCTCAAAGGCCTCAGATTAACAACAGGAATTTCTATGCTACACCACAAAACAGATCCCAATCTTCTTCCACTTATCTTAACAATCAGACCAAGAATCATTCAAATCCATCCTATACACAATCATCACCTTCTATACACTCTAAACCCATACTGCCTACTCCTTTTCCTTCTTCATCTTCTTCTATCTCCTCTTCTTCCTCTTCTTCTAATCAGAAATCTATCTCTCAGTACCCAAGGTATGTGTCAGCTCAAGAAAGGGCGGATAAAATAGCTAAGGGCCTTTGCTATTACTGTGATCAGCCTTATCATAGAAATCATATATGTGCCAACAAGAAAACACAGTTGTTTTTGGTTGAAGTGGCTGGGGAGGATGATGATTGTCCAGAAAATGTGGCATGCTTATCTGAGACTAATCAGGAAGTAACTGAATTTTATGAGATGCATAATATGGAACCTGTTATTTCAGTAAATGCATTGAGTGGGGTACAAGGTCAGAGAACTATGAGGGTTACTGCTTATGTTGGGAAGAAAGCTTTACAGGTGTTAATAGATTCGAGAAGCACCCATAATTTCTTGGATTGTACTGTTGCTAAGAAGTTGGGGTGCCTGTTGAAGCCTATTCCTCCACAGGCTGGAACTGTGGCAGATGGGGCTCAAGTTCCTTGCAAGTTCATGTGTGAGAATTTCCATTGGAAATTACAGAGACATAATTTCAATTCCAATGTCTTATTGCTGCCACTGGCTAGTTGTGATATGGTATTGGGAACACAATGGTTGTGTACCTTGGGAGACATCAGTTGGAATTTTAGTAAGCTCACCATGAGGTTTCATTATGAAGGCCTAGATATCTTGTTAAGGGGATTACAACCTAAACAACTTAAGTTGGTAAAAGGAGAACCAAAACTCTTGGAGAATGCTGCTCAACTATGTTTGTTACAGTTGATACAAGGGCCTGACATGTTTCAATGTGATGCTGTTAACAAGAATTTTGATCTGAGTACTTTTTGCTTTTCTGTTGAGTGTAAGGATACTCCTGCAATCCTCCAAGGTGTCTTGAATGAGTTTGAGGACATCTTTGCAGAACCAAAAGAGTTACCTCCATCTAGAGGACCCTTTGATCATCGAATTCCTCTCATCTCTGGTTCTAATCCTGTAAGTGTAAGGCCTTATAGATACCCCCTTAAACAGAGGGACATCATTGAGCAACAGGTGCAAGATATGCTTGACAGGGGTATCATTCAGCATAGTTCCAGTCCATTTGCATCCCCTGTGGTTTTGGTGGGCAAAAAGGATGGGAGTTGGAAGCTGTGTGTGGACTATAGAGCTTTGAACAACCAAACTGTTAAAGACAAATTCCCTATTCCAGTTGTGGATGAGCTGATTGATGAACTAGCAGGATCAGCAGTTTTCAGCAAAATAGATTTGAGATCAGGTTATCACCAGATCAGAATGGCCAACCAAGATGTGTTCAAGACAGCTTTCAAGACTCAACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_224123.p2 GENE.R_Transcript_224123~~R_Transcript_224123.p2 ORF type:complete len:738 (-),score=145.74,Retrotrans_gag|PF03732.13|1e+03,Retrotrans_gag|PF03732.13|1.2e-06 R_Transcript_224123:3001-5160(-)
MVNTRMEEQIKELDQKFGEKYANIEQQLAKLMEMVSNKTPDSSSSDSEVNTQHTSNKPLHFSPKVEFPQFEGKDTNMWILKCNRYFELCNIPEAQKINLASIHMVGRAAVWFSSYIMSRPHISWGEFVIDVGMRFKDDSESKVVEKFNKLQQYGTLEDYVDQFEGLKALMLQRNPLLPANYFLDSFIAGLKPTLKPFVMAFNPATLAAAVHYARLQEEAIASQRPQINNRNFYATPQNRSQSSSTYLNNQTKNHSNPSYTQSSPSIHSKPILPTPFPSSSSSISSSSSSSNQKSISQYPRYVSAQERADKIAKGLCYYCDQPYHRNHICANKKTQLFLVEVAGEDDDCPENVACLSETNQEVTEFYEMHNMEPVISVNALSGVQGQRTMRVTAYVGKKALQVLIDSRSTHNFLDCTVAKKLGCLLKPIPPQAGTVADGAQVPCKFMCENFHWKLQRHNFNSNVLLLPLASCDMVLGTQWLCTLGDISWNFSKLTMRFHYEGLDILLRGLQPKQLKLVKGEPKLLENAAQLCLLQLIQGPDMFQCDAVNKNFDLSTFCFSVECKDTPAILQGVLNEFEDIFAEPKELPPSRGPFDHRIPLISGSNPVSVRPYRYPLKQRDIIEQQVQDMLDRGIIQHSSSPFASPVVLVGKKDGSWKLCVDYRALNNQTVKDKFPIPVVDELIDELAGSAVFSKIDLRSGYHQIRMANQDVFKTAFKTQL*

Click here to download the sequence:
Link to NCBI Protein BLAST