Transcript Information: R_Transcript_224400.p1


Annotated TAIR IDAT3G16200.1
Annotated Gene Nameunknown protein; Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5491619-5493605 | Reverse length=456
E-Value1.3E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3477284889317
Replicate 210.816275972032
Replicate 312.2863410743
Condition 2: 8 Hour
Replicate 19.0523500714058
Replicate 212.671166376672
Replicate 37.1506344868191
Condition 3: 24 Hour
Replicate 114.470375464735
Replicate 215.639183576955
Replicate 316.780573593288


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_224400.p1 GENE.R_Transcript_224400~~R_Transcript_224400.p1 ORF type:5prime_partial len:330 (-),score=52.62 R_Transcript_224400:540-1529(-)
CCCTGGTGCAGATCGAAATATGGAAAAACTGTGGAATGGACATCAAAGGATCTAGTCAGAGCTTTGGAAGAGTTTGTACCTATATACGAAACACGGCCTATCAAAAACAATATGTATGGGATGGGATTTGATCATAGCTTTGGGCTTTGGTTTATTGCACGATGGCTGAAGCCAGATCTCATGATTGAGAGTGGTGCCTTCAAAGGGCATTCTACTTGGGTACTGCGGCAGGCTATGCCAGACTCTAGGATAATATCAGTTACACCTCGTCATCCTGAGAAGTATTTGAAAAAGGGTCCAGCTTATGTCGATCAGAATTGCACATACTTTGCAGGCAAGGACTTCATAGATTTTGGAAATGTTGATTGGAAGAGTGTGATGAAGAAGCATGGAGTTACTGATCTAAGTCGAGTTCTTATCTTTTTTGATGACCATCAGAGTGAATTGAAAAGATTGAAGCAGGCATTGATTGCTGGCTTCAAGCATATCGTGTTTGAAGATAACTATGATACTGGAACTGGAGATCATTATTCCTTAAGGCAGATCTGTGATCAAACTTATATAAGAGGTGGTGGCCACAGCTGCTTCAAAGAAAGTGATGAAGCAAGAATAAGAGCAAGACGTAAAGCCTTCTGGGAGAAATCAGTGGATATCGGTGAACTATGTGGGCCCAGTGAAGCTTGGTGGGGAGTGAGAGGATATATGCGAGATGACTTCAATCACAGCAACAAATTAATCTCCTACTCAGAGCACTTTCAGAACAGCAGGTTTTTGGAATCAATTTTAGATGTTTATTGGGAGCTTCCACCAGTTGCCGGTCCATCTCTCACCCACCAGACAAGATACGATCCTGCACGCTCTGTCCCCCCCATCGTTGAAGATGGTCGCTATGGCTTGTTCCAACGGCTTGGTCTTGGCAGGCTGGACACATCTGTATTTAATGGGTACACACAGATGGTGTATGTTCAGATTTCCAAACCGGAATCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_224400.p1 GENE.R_Transcript_224400~~R_Transcript_224400.p1 ORF type:5prime_partial len:330 (-),score=52.62 R_Transcript_224400:540-1529(-)
PWCRSKYGKTVEWTSKDLVRALEEFVPIYETRPIKNNMYGMGFDHSFGLWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDSRIISVTPRHPEKYLKKGPAYVDQNCTYFAGKDFIDFGNVDWKSVMKKHGVTDLSRVLIFFDDHQSELKRLKQALIAGFKHIVFEDNYDTGTGDHYSLRQICDQTYIRGGGHSCFKESDEARIRARRKAFWEKSVDIGELCGPSEAWWGVRGYMRDDFNHSNKLISYSEHFQNSRFLESILDVYWELPPVAGPSLTHQTRYDPARSVPPIVEDGRYGLFQRLGLGRLDTSVFNGYTQMVYVQISKPES*

Click here to download the sequence:
Link to NCBI Protein BLAST