Transcript Information: R_Transcript_224401.p1


Annotated TAIR IDAT3G16200.1
Annotated Gene Nameunknown protein; Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5491619-5493605 | Reverse length=456
E-Value1.7E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2396734975899
Replicate 23.5076172460169
Replicate 35.2820241986422
Condition 2: 8 Hour
Replicate 14.032965991311
Replicate 22.6833058209423
Replicate 34.4418058929888
Condition 3: 24 Hour
Replicate 18.2107922320259
Replicate 27.6285248397997
Replicate 38.2915775402129


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_224401.p1 GENE.R_Transcript_224401~~R_Transcript_224401.p1 ORF type:5prime_partial len:425 (+),score=51.40 R_Transcript_224401:2-1276(+)
AACAATCTCGTTCTTTCTTTATCTAATGGCATTCCCATTTCCCACCACCCGATTTATTTCCAATTAGGGCAACAAAAAAAAATTCAATTGTACCAAAAATACACTTCACTCTACACTGTATACACACTACAAGCCCATCCAGGTGTTTCCGAATCTGAGATTTTCCTCTCACCATCTCCTACAACTTTAACGACCTCACACAGTCACTCACATCACACTCACACCTCAAGAAAAATGGAAAGAGAAGGAGTGTTAGAGAGAATGCACTCAACATCAACAAGAAGAGTAACAGCACTTGATGGTGGCAGTGATGACAACGATGAAGATGACGAGTCCAAGACCAAAAAGATCATTCCTTTCACTACTCGGATTACCAACTTCATTTCTCGTCATGGCCTCCTCTGGCCCTGTCTTGGGCTTGTCTTTGTTGTCTTCTTATTCGTCTCTTCTGTCGTCTTCTACACTCGCACTGTCGTCTGTGTCTCCGATTCTCCTTACGCTATCTCTCGGGCCGGGTTCTTCGGGCTTGATGGGCTTGGCTCCGACTTCGGTTTGCTTGGTGTCCCCTGGTGCAGATCGAAATACAGAAAAACTGTGGAATGGACATCAAAGGATCTAGTCAGAGCTTTGGAAGAGTTTGTACCTATATACGAAACACGGCCTATCAAAAACAATATGTATGGGATGGGATTTGATCATAGCTTTGGGCTTTGGTTTATTGCACGATGGCTGAAGCCAGATCTCATGATTGAGAGTGGTGCTTTCAAAGGGCATTCTACTTGGGTATTGCGGCAGGCTATGCCAGACACCAGGATAATATCAGTTACACCTCGTCATCCTGAGAAGTATTTGAAAAAGGGTCCAGCGTATGTCGATCAGAATTGCACATACTTTGCAGGCAAGGACTTCATAGATTTTGGAAATGTTGATTGGAAGAGTGTGATGAAGAAGCATGGAGTTACTGATCTAAGTCGAGTTCTTATCTTTTTTGATGACCATCAGAGTGAATTGAAAAGATTGAAGCAGGCATTGAATGCTGGCTTCAAGCATATCGTGTTTGAAGATAACTATGATACTGGAACTGGAGATCATTATTCCTTAAGGCAGATCTGTGATCAAACTTATATAAGAGGTGGTGGCCACAGCTGCTTCAAAGAAAGTGATGAAGCAAGAATAAGAGCAAGACGTAAAGCCTTCTGGGAGAAATCAGTGGATATCGGTGAACTATGTGGGCCCAGTGAAGCTTGGTGGGGAGTGAGGATATATGCGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_224401.p1 GENE.R_Transcript_224401~~R_Transcript_224401.p1 ORF type:5prime_partial len:425 (+),score=51.40 R_Transcript_224401:2-1276(+)
NNLVLSLSNGIPISHHPIYFQLGQQKKIQLYQKYTSLYTVYTLQAHPGVSESEIFLSPSPTTLTTSHSHSHHTHTSRKMEREGVLERMHSTSTRRVTALDGGSDDNDEDDESKTKKIIPFTTRITNFISRHGLLWPCLGLVFVVFLFVSSVVFYTRTVVCVSDSPYAISRAGFFGLDGLGSDFGLLGVPWCRSKYRKTVEWTSKDLVRALEEFVPIYETRPIKNNMYGMGFDHSFGLWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTRIISVTPRHPEKYLKKGPAYVDQNCTYFAGKDFIDFGNVDWKSVMKKHGVTDLSRVLIFFDDHQSELKRLKQALNAGFKHIVFEDNYDTGTGDHYSLRQICDQTYIRGGGHSCFKESDEARIRARRKAFWEKSVDIGELCGPSEAWWGVRIYAR*

Click here to download the sequence:
Link to NCBI Protein BLAST