Transcript Information: R_Transcript_224441.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value9E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34011728487054
Replicate 20.39123541148382
Replicate 30.56911149307211
Condition 2: 8 Hour
Replicate 10.15208611768475
Replicate 20.27777492970417
Replicate 31.4656580004039
Condition 3: 24 Hour
Replicate 10.28519015189695
Replicate 20.27397837131152
Replicate 30.4078454289484


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_224441.p1 GENE.R_Transcript_224441~~R_Transcript_224441.p1 ORF type:complete len:161 (+),score=17.63,RVT_1|PF00078.23|2e-13 R_Transcript_224441:2114-2596(+)
ATGAGCATCAATGGTAGTCCTAGGGGATATTTTGAGGGGATGTGTGGATTAAGGCAGGGAGATCCCATTTCTCCCTATCCTTTTGTTCTCTGTATAGAAGGCTTATCTCGAATGTTGAGGAATATGGGTACCATGTACGGGTTTTCTTTCCATCCTAAAACTGTCAGAGTAAGAATGAATCACATCATTTTTGCTGATGATCTTCTGGTCTTCACTAGAGGGGATGTCCCTGTAGTACAGAAGGTTTTCAACTGTCTTAATACTTTTTCAACTATGTCTGGTGTACAAATTAATAGAGCAGAGACAGAGGTGTATATGGGTGGTATCATTGTAGATATTCAAAAAGAAATACTGGATTTGACAAGTTTTGTGAAGGGAGTATTGCCAGTAAGATACTTGGGCTTACCCTTAAGCTTAGCAGGCATTTCACATGCCATGTGCACAAGTCTGATTGATAAAATCAAAAGGAAATTAAATCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_224441.p1 GENE.R_Transcript_224441~~R_Transcript_224441.p1 ORF type:complete len:161 (+),score=17.63,RVT_1|PF00078.23|2e-13 R_Transcript_224441:2114-2596(+)
MSINGSPRGYFEGMCGLRQGDPISPYPFVLCIEGLSRMLRNMGTMYGFSFHPKTVRVRMNHIIFADDLLVFTRGDVPVVQKVFNCLNTFSTMSGVQINRAETEVYMGGIIVDIQKEILDLTSFVKGVLPVRYLGLPLSLAGISHAMCTSLIDKIKRKLNH*

Click here to download the sequence:
Link to NCBI Protein BLAST