Transcript Information: R_Transcript_22460.p1


Annotated TAIR IDAT5G22920.1
Annotated Gene NameCHY-type/CTCHY-type/RING-type Zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7665143-7667031 | Forward length=291
E-Value2.3E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.96069305145
Replicate 226.358664911108
Replicate 347.214246915811
Condition 2: 8 Hour
Replicate 110.745595408503
Replicate 216.89131362104
Replicate 317.563968549943
Condition 3: 24 Hour
Replicate 110.983411371528
Replicate 24.8394632817454
Replicate 39.684128332692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22460.p1 GENE.R_Transcript_22460~~R_Transcript_22460.p1 ORF type:complete len:278 (+),score=42.77,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|6.3e-24,zf-CHY|PF05495.8|2.5e-20,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|2.3e+03,zf-RING_2|PF13639.2|2.4e+02,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.5e-06,zf-RING_2|PF13639.2|15 R_Transcript_22460:146-979(+)
ATGAGTTGTGGGTGTGAGACCCAATTGGCCTCCATCAATGGCTCAGAACAATTCTTCAAATCTTCAATTGATTTCATGGAGCTTTCAGCTGGGAATTATGGATGCAAGCACTATAGGAGGAGGTGTAAGATTAGAGCACCCTGTTGTAATGAGATATTTGATTGTAGACATTGTCATAATGAAGCCAAGAATTCTCTTGAAATTGATCCTTTGGACCGACATGATATTCCACGCCATGATATTAAAAAGGTGATATGCTCCCTCTGTGGTGAAGAACAAGATGTTCAACAGAACTGCGTCAAGTGTGGGGTTTGCATGGGGAAGTACTTTTGTGCAGTATGCAATTTCTTTGATGACGATGTTTCAAAGAAACAGTATCATTGTCATGACTGTGGAATATGCAGGACTGGAGGCGAAGAGAATTTCTTCCATTGTTCATCTTGTGGCTGCTGTTATCCAAAGACTATGAGGGGTACACATAAGTGCTTGGAGAAAGCAATGCATCATAATTGCCCAGTTTGTTGTGAGTATCTATTTGATACAACGAAGGAAGTCAGCATACTTCCTTGTGGGCATACAATGCATTTGGAATGCACTAAGCAGATGGAGCAGCACTACCGGTATGCATGTCCTATTTGCTTGAAGTCTTTGTGTGATATGTCGAAAGTCTGGAGAAAGCTAGAAGAAGAGATTGCTTCTACGCCATTGCCTGAGGTGTGCCAGAGGATGGTGCGGATTCTCTGCAATGATTGTGAGGCCAATTCCGAAGTCCAATACCATGTATTAGCACATAAATGCCCCAATTGCAGCTCCTACAACACAAAACTGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22460.p1 GENE.R_Transcript_22460~~R_Transcript_22460.p1 ORF type:complete len:278 (+),score=42.77,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|6.3e-24,zf-CHY|PF05495.8|2.5e-20,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|2.3e+03,zf-RING_2|PF13639.2|2.4e+02,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.5e-06,zf-RING_2|PF13639.2|15 R_Transcript_22460:146-979(+)
MSCGCETQLASINGSEQFFKSSIDFMELSAGNYGCKHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLEIDPLDRHDIPRHDIKKVICSLCGEEQDVQQNCVKCGVCMGKYFCAVCNFFDDDVSKKQYHCHDCGICRTGGEENFFHCSSCGCCYPKTMRGTHKCLEKAMHHNCPVCCEYLFDTTKEVSILPCGHTMHLECTKQMEQHYRYACPICLKSLCDMSKVWRKLEEEIASTPLPEVCQRMVRILCNDCEANSEVQYHVLAHKCPNCSSYNTKLM*

Click here to download the sequence:
Link to NCBI Protein BLAST