Transcript Information: R_Transcript_224717.p1


Annotated TAIR IDAT2G28290.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SYD, CHR3
Annotation TypeHomolog
Chromosome Positionchr2:12056771-12072950 | Forward length=3574
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13037829253371
Replicate 20.29994714880426
Replicate 30.32723910851646
Condition 2: 8 Hour
Replicate 10.34979807067493
Replicate 20.47916175373969
Replicate 30.51861744629677
Condition 3: 24 Hour
Replicate 10.65593734936297
Replicate 20.47261269051237
Replicate 30.62536299105421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_224717.p1 GENE.R_Transcript_224717~~R_Transcript_224717.p1 ORF type:5prime_partial len:140 (+),score=30.15 R_Transcript_224717:3-422(+)
AGACTAGTGCCAGGAAATGATGCTAACCGGTTGCCTAGAAATGCTACCCATGATGACAATATTGCTTTGGAGAATCAGACAAGGTCCATCGCAGATGTAACAAAAGTGGTTCCTGCCTCGGAAACAAGTTTGATGCATCAAAATTCTGGTACTCTTGTTTCTATGGATAAATCTGTGGAAGATGAAGGGGAGGATAAGTCTCTGTCCGGAGGTTTGCCCCCTTCTCCAAAGTACACGTTGTCTGAAAAGTGGATACAGGCTCACCAAAAAAGGAAGTTTGCTGCAGAGCAGAGATGGGTTCAGAAACTGCAAAAAGCGGATCAGAAAATTACTTCTTGTTTCCATGAGTTGAAGGTTAGGTTTGTTGATTCCCTTAGTGTTTATTTACAGATGTTAATGATTTCTTATAGCTTCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_224717.p1 GENE.R_Transcript_224717~~R_Transcript_224717.p1 ORF type:5prime_partial len:140 (+),score=30.15 R_Transcript_224717:3-422(+)
RLVPGNDANRLPRNATHDDNIALENQTRSIADVTKVVPASETSLMHQNSGTLVSMDKSVEDEGEDKSLSGGLPPSPKYTLSEKWIQAHQKRKFAAEQRWVQKLQKADQKITSCFHELKVRFVDSLSVYLQMLMISYSFC*

Click here to download the sequence:
Link to NCBI Protein BLAST