Transcript Information: R_Transcript_224947.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37764746802866
Replicate 20.43440621550962
Replicate 30.47393250198936
Condition 2: 8 Hour
Replicate 10.5066041023568
Replicate 20
Replicate 30.62591760759955
Condition 3: 24 Hour
Replicate 10.15832970501865
Replicate 20.15210523372812
Replicate 30.15094968749584


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_224947.p1 GENE.R_Transcript_224947~~R_Transcript_224947.p1 ORF type:5prime_partial len:145 (+),score=15.60,zf-RVT|PF13966.2|5.4e-06,zf-RVT|PF13966.2|6e+03 R_Transcript_224947:3-437(+)
GGGTTAATACTAATGATATGCAGACGGCCTTGTTGGTTTCTTTCACTGGATGTGTGTGTCATGTGTGGTTTGAGTGGGGAGACAGCTTCTCATCTTTTCTTCCATTGTCCTACAGTGCGGTCTTTGTGGGCAAGGCTTTTTGGTGTGTGTGGGGAGGCCTTGGTGTGCCCTTCGACAGTTTTGGATTTCATCCACATTCGTTTTTGGGGTTTAGGAAGGGATAAGGAGAAGGATATTTTATGCCGTAATGCGATTTTGGCAACCCTATGGTGTGTTTGGTTGGAGAGGAACGCTCGTGTGTTTAAGCTGATTTCTCTCCCTATCCCTCTTTTGTGGGAGCGTGTCATTTTCTTGGCCTCCCTGTGGAGTAAGGCTGGGGGAGCTTTTTGTAGTTACTCTCTTATTACTGTACAACGCAACTGGGCAAATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_224947.p1 GENE.R_Transcript_224947~~R_Transcript_224947.p1 ORF type:5prime_partial len:145 (+),score=15.60,zf-RVT|PF13966.2|5.4e-06,zf-RVT|PF13966.2|6e+03 R_Transcript_224947:3-437(+)
GLILMICRRPCWFLSLDVCVMCGLSGETASHLFFHCPTVRSLWARLFGVCGEALVCPSTVLDFIHIRFWGLGRDKEKDILCRNAILATLWCVWLERNARVFKLISLPIPLLWERVIFLASLWSKAGGAFCSYSLITVQRNWANL*

Click here to download the sequence:
Link to NCBI Protein BLAST