Transcript Information: R_Transcript_225297.p1


Annotated TAIR IDAT4G03430.1
Annotated Gene Namepre-mRNA splicing factor-related
Annotated Gene Symbol(s)STA1, EMB2770
Annotation TypeHomolog
Chromosome Positionchr4:1517411-1520500 | Reverse length=1029
E-Value4E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24122855887294
Replicate 20.6474630084321
Replicate 30.70637516816329
Condition 2: 8 Hour
Replicate 10.80900434847726
Replicate 21.0835669614671
Replicate 30.51975977547364
Condition 3: 24 Hour
Replicate 10.65738214528668
Replicate 20.72869798096621
Replicate 30.77137285240167


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_225297.p1 GENE.R_Transcript_225297~~R_Transcript_225297.p1 ORF type:5prime_partial len:454 (+),score=110.60,TPR_14|PF13428.2|8.2,TPR_14|PF13428.2|3.3,TPR_14|PF13428.2|44,TPR_14|PF13428.2|0.0018,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|0.0037,TPR_2|PF07719.13|2.3e+03,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|3.7e+02,TPR_2|PF07719.13|0.077,TPR_16|PF13432.2|1.3e+03,TPR_16|PF13432.2|0.77,TPR_16|PF13432.2|18,TPR_16|PF13432.2|0.2,TPR_11|PF13414.2|7.5,TPR_11|PF13414.2|0.017,TPR_11|PF13414.2|7.7e+02,TPR_11|PF13414.2|4.1,TPR_8|PF13181.2|2.3e+03,TPR_8|PF13181.2|0.016,TPR_8|PF13181.2|1.6e+04,TPR_8|PF13181.2|6.2,TPR_19|PF14559.2|5e+02,TPR_19|PF14559.2|9.3e+02,TPR_19|PF14559.2|0.17,TPR_19|PF14559.2|4.7 R_Transcript_225297:2-1363(+)
ATTGATATTGGGGTTGAGGAACAGGATAGGGAGAGGACATGGGTTGCTGATGCTGAAGAGTGCAAGAAAAGAGGGTCTATTGAAACTGCAAGAGCTATATATGCTCATGCTCTTCGTTTCTTTCACAAGAATAAGAGTATTTGGCTTGAAGCTGCACAACTTGAGAAGAGATGTGGGACTAGAAAGTCTCTTTACGCCTTGTTGTCGAGGGCAGTTTGTAATGTGCCACGGGCTGAAACTCTCTGGCTCATGTTCGCAAAAGAAAAGTTGCTTGCTGGTGATGTGCCGGGTTATCGGGCCATTGTACAACGGGCTTCTGAAACAATCCCCTCGAAAATCTGGCGAAATGCTCTCATCCTGGAACATCTTTGTTGGAAACCTCCGAAATCAGTGAAACTCATCTTTCTCAAGTCCCCAAAAACAGCAGAGGTTGAAGTAGCGTGGAGGCAATTGCCCCCTGTTGAGAGATTATTAGGTAACACTTCCAAGGAGAGGAGGATTCTTAATTCATATCTGCAACGCTTCCCATCATTCTTCAAGGGATGGTTGAGGATTGGGCGGATTAAGGAAAGACTTGGACAACAGGCACAGGCAAAGGAAGCTTATGAGTCTGGTCTTCGGAACTGCCCCAACTGCCTTCATCTCTGGCTTTCGCTTTCTGACCTCGAGGAGAAGATAATGGGCTTGAGTAAAGCTCGAGCTGTGCTCACTATGGCTAGGGAGAAGATTCCTAAGAACCCTGAATTGTGGCTTGCTGCAGTTAGAGCTGAGCTCAGGCATGGCAGTAAGAGTGAGGCTGATATCTTGATGGCGAAGGCCATCCAGGAATGCCCTAACAGTGGTATCTTGTGGGCAGCTCAAATTGAGATGGTTCCCTGTCCACAACGCAAATCCAAGAGTGCAGATGCACTTAAGAAATGTGCCGACAATCCCCATGATGTTGCTGCAGTGTCGAAATTGTTTTGGCAAGACAGGAAAGTGGATGAGGCAAGAAAGTGGCTCCAGAGGGCTGTGGCACTTGCTCCTGATATTGGGGATTTCTGGGCCTTGTACTACATATTTGAAAGTCAGCATGGAACTGAGGAGAAAAAGAAAGATGTAACGGAGAGATGTATCACGGATGAACCAGAACTTGGCGAGAGATGCGAGGCCATTTCAGAGAAATGCAAGTTTACCTGGGGACCAACTGTCACAACGGAAACAATTTTGATGGAAGTCGCATATGACTTGGGAGTTGGAAAAAGAGAGGAAACAATTTTGATGGAAGTCGTATATGACTTGGAGTTCGAACTAGAAAAAGAAAAAAGTGACGATGAAAAAGAAAAAGAAAAAACTGAGGTTATTTCTTTCACACTATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_225297.p1 GENE.R_Transcript_225297~~R_Transcript_225297.p1 ORF type:5prime_partial len:454 (+),score=110.60,TPR_14|PF13428.2|8.2,TPR_14|PF13428.2|3.3,TPR_14|PF13428.2|44,TPR_14|PF13428.2|0.0018,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|0.0037,TPR_2|PF07719.13|2.3e+03,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|3.7e+02,TPR_2|PF07719.13|0.077,TPR_16|PF13432.2|1.3e+03,TPR_16|PF13432.2|0.77,TPR_16|PF13432.2|18,TPR_16|PF13432.2|0.2,TPR_11|PF13414.2|7.5,TPR_11|PF13414.2|0.017,TPR_11|PF13414.2|7.7e+02,TPR_11|PF13414.2|4.1,TPR_8|PF13181.2|2.3e+03,TPR_8|PF13181.2|0.016,TPR_8|PF13181.2|1.6e+04,TPR_8|PF13181.2|6.2,TPR_19|PF14559.2|5e+02,TPR_19|PF14559.2|9.3e+02,TPR_19|PF14559.2|0.17,TPR_19|PF14559.2|4.7 R_Transcript_225297:2-1363(+)
IDIGVEEQDRERTWVADAEECKKRGSIETARAIYAHALRFFHKNKSIWLEAAQLEKRCGTRKSLYALLSRAVCNVPRAETLWLMFAKEKLLAGDVPGYRAIVQRASETIPSKIWRNALILEHLCWKPPKSVKLIFLKSPKTAEVEVAWRQLPPVERLLGNTSKERRILNSYLQRFPSFFKGWLRIGRIKERLGQQAQAKEAYESGLRNCPNCLHLWLSLSDLEEKIMGLSKARAVLTMAREKIPKNPELWLAAVRAELRHGSKSEADILMAKAIQECPNSGILWAAQIEMVPCPQRKSKSADALKKCADNPHDVAAVSKLFWQDRKVDEARKWLQRAVALAPDIGDFWALYYIFESQHGTEEKKKDVTERCITDEPELGERCEAISEKCKFTWGPTVTTETILMEVAYDLGVGKREETILMEVVYDLEFELEKEKSDDEKEKEKTEVISFTLC*

Click here to download the sequence:
Link to NCBI Protein BLAST