Transcript Information: R_Transcript_225298.p1


Annotated TAIR IDAT4G03430.1
Annotated Gene Namepre-mRNA splicing factor-related
Annotated Gene Symbol(s)STA1, EMB2770
Annotation TypeOrtholog
Chromosome Positionchr4:1517411-1520500 | Reverse length=1029
E-Value2.2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40006489763767
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.26833824599721
Replicate 20.61262689975851
Replicate 30.14919132016756
Condition 3: 24 Hour
Replicate 10.06289810199371
Replicate 20.48340293458799
Replicate 30.29983157105339


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_225298.p1 GENE.R_Transcript_225298~~R_Transcript_225298.p1 ORF type:5prime_partial len:365 (+),score=84.53,TPR_14|PF13428.2|6.1,TPR_14|PF13428.2|2.4,TPR_14|PF13428.2|33,TPR_14|PF13428.2|0.83,TPR_14|PF13428.2|17,TPR_14|PF13428.2|1.1 R_Transcript_225298:2-1096(+)
ATTGATATTGGGGTTGAGGAACAGGATAGGGAGAGGACATGGGTTGCTGATGCTGAAGAGTGCAAGAAAAGAGGGTCTATTGAAACTGCAAGAGCTATATATGCTCATGCTCTTCGTTTCTTTCACAAGAATAAGAGTATTTGGCTTGAAGCTGCACAACTTGAGAAGAGATGTGGGACTAGAAAGTCTCTTTACGCCTTGTTGTCGAGGGCAGTTTGTAATGTGCCACGGGCTGAAACTCTCTGGCTCATGTTCGCAAAAGAAAAGTTGCTTGCTGGTGATGTGCCGGGTTATCGGGCCATTGTACAACGGGCTTCTGAAACAATCCCCTCGAAAATCTGGCGAAATGCTCTCATCCTGGAACATCTTTGTTGGAAACCTCCGAAATCAGTGAAACTCATCTTTCTCAAGTCCCCAAAAACAGCAGAGGTTGAAGTAGCGTGGAGGCAATTGCCCCCTGTTGAGAGATTATTAGGTAACACTTCCAAGGAGAGGAGGATTCTTAATTCATATCTGCAACGCTTCCCATCATTCTTCAAGGGATGGTTGAGGATTGGGCGGATTAAGGAAAGACTTGGACAACAGGCACAGGCAAAGGAAGCTTATGAGTCTGGTCTTCGGAACTGCCTTCCTCTCTGGCTTTCGCTTTCTAACCTCGAGGAGAAGATAATGGGCCTGAGTAAAGCTCGAGCTGTGCTCACTATGGCTAGGGAGAAGATTCCTAAGAACCCTGAATTGTGGCTTGCTGCAGTTAGAGCTGAGCTCAGGCATGGCAGTAAGAGTGAGGCTGATATCTTGATGGCGAAGGCCATCCAGGAATGCCCTAACAGTGGTATCTTGTGGGCAGCTCAAATTGAGATGGTTCCCTGTCCACAACGCAAATCCAAGAGTGCAGATGCACTAAAGAAATGTGCCAACAAAATCCCCATGTCGTTGCTGCTGTGTCCAAATTGTTTTGGCATGACAGCAAAGTGGATGAGGCAAGAAAGTGGCTCCAGAGGGCTGTGGCACTTGCTCCTGATATTGGGGATTTCTGGGCCTTGTACTACATATTTGAACGTCAGCATGGAACTGAGGAGAAACAGAAAGATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_225298.p1 GENE.R_Transcript_225298~~R_Transcript_225298.p1 ORF type:5prime_partial len:365 (+),score=84.53,TPR_14|PF13428.2|6.1,TPR_14|PF13428.2|2.4,TPR_14|PF13428.2|33,TPR_14|PF13428.2|0.83,TPR_14|PF13428.2|17,TPR_14|PF13428.2|1.1 R_Transcript_225298:2-1096(+)
IDIGVEEQDRERTWVADAEECKKRGSIETARAIYAHALRFFHKNKSIWLEAAQLEKRCGTRKSLYALLSRAVCNVPRAETLWLMFAKEKLLAGDVPGYRAIVQRASETIPSKIWRNALILEHLCWKPPKSVKLIFLKSPKTAEVEVAWRQLPPVERLLGNTSKERRILNSYLQRFPSFFKGWLRIGRIKERLGQQAQAKEAYESGLRNCLPLWLSLSNLEEKIMGLSKARAVLTMAREKIPKNPELWLAAVRAELRHGSKSEADILMAKAIQECPNSGILWAAQIEMVPCPQRKSKSADALKKCANKIPMSLLLCPNCFGMTAKWMRQESGSRGLWHLLLILGISGPCTTYLNVSMELRRNRKM*

Click here to download the sequence:
Link to NCBI Protein BLAST