Transcript Information: R_Transcript_22531.p1


Annotated TAIR IDAT4G04910.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)NSF
Annotation TypeOrtholog
Chromosome Positionchr4:2489696-2495666 | Reverse length=742
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.037253516364
Replicate 230.051847670674
Replicate 338.988202357533
Condition 2: 8 Hour
Replicate 131.315255850899
Replicate 229.510279436667
Replicate 343.415689075701
Condition 3: 24 Hour
Replicate 151.537934592805
Replicate 246.571104487314
Replicate 350.029039284337


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22531.p1 GENE.R_Transcript_22531~~R_Transcript_22531.p1 ORF type:complete len:735 (+),score=146.44,AAA|PF00004.25|2.2e+03,AAA|PF00004.25|2.5e-38,AAA|PF00004.25|5.1e-08,AAA_5|PF07728.10|0.00017,AAA_5|PF07728.10|9.8e+03,AAA_5|PF07728.10|27,AAA_5|PF07728.10|3.6e+03,AAA_2|PF07724.10|1.2e-05,AAA_2|PF07724.10|1.7e+02,CDC48_N|PF02359.14|2.5e-06,AAA_22|PF13401.2|0.0067,AAA_22|PF13401.2|66,AAA_22|PF13401.2|3.5e+02 R_Transcript_22531:177-2381(+)
ATGGCGAATGACACGATGAAGGTCACCAACACGCCTGGCAAAGATCTCGTCTCAACGAATTTCGCTTACTGCTCAGTTTCCGACTTCCGTCGCCTTGTCGCTCCTGGATCGAGCCTCGCTTTCGCTCTCGTTGGCGATTCTTGGGTTCTCTCCATCGGATCACATAATGAAATATCCAATGGGAACATAGGCCTTAATGCTATTCAGAGGAAGTATCTGAGAGTTTCCACTGGAGACACAATTTCTGTTCGAAGATTCATTCCTCCAGAAGATTTCAACCTTGCTTTGCTTACCCTTGAGCTGGACTATTTATCAAGAGCAAAAGCAAGAGAAGAGCAGGTTGATGCTCAGGTTCTGACTCAATTGCTTAAGAGAAGACTTACTGACCAGGTCATGACAGTAGGTCAAAAGGTGACCTTTGAGTATCTAGGCAATAATTTTCTTTTCACAGTCAATCAAGCTGCGGTAGAGGGACAGGGGGAAGTAGACATAGAGCGAGGGATACTGTCAGCAGAGACATACATTGTTTTCGAAGCAGCTGCTGGCAGTGGTTTAAAGATAACCAACCAGCGTGAATCGGCTAGCAGCAACATCTTTCGGCAGAAAGAATTTAATTTGAAGGCTCTTGGTATAGGTGGTCTTAGTGCGGAGTTTGCAGATATATTTCGAAGAGCTTTTGCTTCTAGGGTTTTCCCAGCAAGTGTTACCAGCAAATTGGGCATCAAGCATGTTAAAGGAATGCTTCTTTTTGGGCCCCCTGGTACTGGTAAAACTCTTATGGCACGCCAGATTGGAAAGATGTTAAATGGAAAAGAGCCTAAGATCGTCAATGGGCCTGAAGTATTGAGCAAGTTTGTTGGTGAGACAGAGAAGAATGTGAGGGACTTATTTGCTGATGCTGAGCATGATCAAAGGACTCGAGGTGATCAAAGTGACCTGCATGTTATTATCTTTGACGAAATTGATGCTATTTGTAAGTCCAGAGGCTCTACCAGGGATGGTACAGGAGTTCATGATAGCATTGTTAACCAGCTCTTGACGAAGATTGATGGAGTGGAGGCCCTCAATAATGTATTGCTGATTGGGATGACTAACAGAAGAGATTTGCTTGATGAAGCACTTTTGAGGCCTGGGCGTTTGGAGGTTCAGGTGGAGATAAGCCTCCCAGATGAAGCAGGACGTTTGCAAATTCTTGAAATACATACAAACAAAATGAAAGAAAATTCTTTCTTGTCACCAGATGTCAATTTGGCTGAAATTGCTGCGAGGACAAAGAATTACAGTGGGGCAGAGCTTGAAGGTGTTGTGAAGAGCGCCGTCTCGTATGCTTTGAACAGGCAATTAAGCATGGATGATCTAACAAAGCCAGTGGATGAAGAGAATATAAAAGTTACAATGGATGGCTTTTTGAATGCGCTTGAGGAGGTTAAACCAGCATTTGGAGCTTCCACTAGTGACCTTGAACGGTACAGGCTTAACGGCATGGTGGATTGTGGTGCACGTCATGAACATATCCAGCAGCGAACCATGATGCTAGCCGAACAAGTGAAACTTAGTAAAGGCAGTCCACTAGTGACTTGTCTCCTTGAGGGTCCGGCTGGAAGTGGAAAGAGTGCGATGGCTGCTACAGTTGGTATCTGTAGTGATTTCCCATACGTGAAGATTGTGTCTGCAGAATCCATGATTGGTCTCAGCGAGAGTACTAAATGTGCCCATATTGTCAAGGTGTTTGAGGATGCTTACAAGTCACCGATGAGCATTATCATACTTGATGACATTGAGAGGCTGGTAGAATATGTGGCAATTGGTCCCCGCTTTTCAAATATAATTTCCCAAACATTGATGGTTTTATTGAAACGACTTCCTCCACCGGGAAAGAAACTTCTTGTGATTGGGACAAGCAGCGAAGTAGGTTTCTTGGATTCAATTGGCATTCGTGAGACATTCTCAGTCACTTACAATGTCCCAACGCTGAAAACTGAAGATTCCCAGAAGGTATTGCAACAACTCAGTGTCTTCTCTGGACATGACATAGATTCTGCTGCGGAGGCACTAAATGATATGCCGATCAAGAAGGTGTACATGCTAATCGAAATGGCTGCCCAAGGAATGCATGGTGGCAAATCAGAAGCCATTTTTTCGGGCATAGAAAAAATCGACATATCTCATTTCTACGACTGCCTTCAGGACATTGTCCGATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22531.p1 GENE.R_Transcript_22531~~R_Transcript_22531.p1 ORF type:complete len:735 (+),score=146.44,AAA|PF00004.25|2.2e+03,AAA|PF00004.25|2.5e-38,AAA|PF00004.25|5.1e-08,AAA_5|PF07728.10|0.00017,AAA_5|PF07728.10|9.8e+03,AAA_5|PF07728.10|27,AAA_5|PF07728.10|3.6e+03,AAA_2|PF07724.10|1.2e-05,AAA_2|PF07724.10|1.7e+02,CDC48_N|PF02359.14|2.5e-06,AAA_22|PF13401.2|0.0067,AAA_22|PF13401.2|66,AAA_22|PF13401.2|3.5e+02 R_Transcript_22531:177-2381(+)
MANDTMKVTNTPGKDLVSTNFAYCSVSDFRRLVAPGSSLAFALVGDSWVLSIGSHNEISNGNIGLNAIQRKYLRVSTGDTISVRRFIPPEDFNLALLTLELDYLSRAKAREEQVDAQVLTQLLKRRLTDQVMTVGQKVTFEYLGNNFLFTVNQAAVEGQGEVDIERGILSAETYIVFEAAAGSGLKITNQRESASSNIFRQKEFNLKALGIGGLSAEFADIFRRAFASRVFPASVTSKLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEHDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRRDLLDEALLRPGRLEVQVEISLPDEAGRLQILEIHTNKMKENSFLSPDVNLAEIAARTKNYSGAELEGVVKSAVSYALNRQLSMDDLTKPVDEENIKVTMDGFLNALEEVKPAFGASTSDLERYRLNGMVDCGARHEHIQQRTMMLAEQVKLSKGSPLVTCLLEGPAGSGKSAMAATVGICSDFPYVKIVSAESMIGLSESTKCAHIVKVFEDAYKSPMSIIILDDIERLVEYVAIGPRFSNIISQTLMVLLKRLPPPGKKLLVIGTSSEVGFLDSIGIRETFSVTYNVPTLKTEDSQKVLQQLSVFSGHDIDSAAEALNDMPIKKVYMLIEMAAQGMHGGKSEAIFSGIEKIDISHFYDCLQDIVRY*

Click here to download the sequence:
Link to NCBI Protein BLAST