Transcript Information: R_Transcript_225399.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value8E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20980414890481
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.56289344706311
Replicate 20.89957570625459
Replicate 30.31295880379977
Condition 3: 24 Hour
Replicate 10.13194142084887
Replicate 20.2535087228802
Replicate 30.12579140624654


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_225399.p1 GENE.R_Transcript_225399~~R_Transcript_225399.p1 ORF type:complete len:174 (-),score=20.18,RVT_3|PF13456.2|4.2e-19,RNase_H|PF00075.20|2.1e-05 R_Transcript_225399:412-933(-)
ATGATACGGTGGAACCCTCCAGCTGCAGGTTGGGTGGTTCTTAACACTGACGGGGCAGCCAAGGGGAATCCCGGGCCTGCAGGAGGGGGAGGACTCCTACGAGAGCAAGATGGGCGCTTAGTGATAGGCTTTGCCAGTCGATGGGGTATTTGCACTTCAGTCAGAGCCGAATTGTTAGCACTCAAGCTAGGCCTACAATTAGCTAAGGAGCGAGATGTTCGACGACTAATCGTCAGAGTGGATTCTGAAGTAATCCTTCATATGTTAGACAGGGAGCTACAAGAAGGTCATGCATTCCACAACATACTTGTCCAGTGCAAGCAACTTCTGAAGGCTAATAGTTGGGTGACTAGAATTCAACATTGTTACAGGGAAGCCAACAGAGCTGCGGATTGGTTGGCAAACCTGGGAGTGACTCAAGAAATGCCGGAGCAGATCTTCTCCTCTCTGCCTGATCCACTACATAGCATTTTGCTTGAAGATTTTATAGGCGTTGCTTTTCCTCGTAGGATAGTGGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_225399.p1 GENE.R_Transcript_225399~~R_Transcript_225399.p1 ORF type:complete len:174 (-),score=20.18,RVT_3|PF13456.2|4.2e-19,RNase_H|PF00075.20|2.1e-05 R_Transcript_225399:412-933(-)
MIRWNPPAAGWVVLNTDGAAKGNPGPAGGGGLLREQDGRLVIGFASRWGICTSVRAELLALKLGLQLAKERDVRRLIVRVDSEVILHMLDRELQEGHAFHNILVQCKQLLKANSWVTRIQHCYREANRAADWLANLGVTQEMPEQIFSSLPDPLHSILLEDFIGVAFPRRIVV*

Click here to download the sequence:
Link to NCBI Protein BLAST