Transcript Information: R_Transcript_225541.p1


Annotated TAIR IDAT2G20080.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8663115-8664735 | Reverse length=178
E-Value5E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.634885598425
Replicate 20.18257652535911
Replicate 30.39837804515048
Condition 2: 8 Hour
Replicate 10
Replicate 20.19444245079292
Replicate 30
Condition 3: 24 Hour
Replicate 10.19963310632786
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_225541.p1 GENE.R_Transcript_225541~~R_Transcript_225541.p1 ORF type:complete len:115 (+),score=21.76 R_Transcript_225541:131-475(+)
ATGGCAAGTGATCATCCAAACAACAACATGGGAAATGAGAGATCTGGTGGTTCTTCAAATTCTTCCTCTTCAAATTCCTCAGGAAAGAAAGTCAAAAACAAAAGTGGTGGTAGTAATTCAGACAAGCCAAAACAACCTCAAAGAGGCCTTGGTGTTGCTCAACTTGAGAAGATTAGACTTCACAGTCATGCTAGTTGCGGTTTTATCCCTTCTCCTCAACACCCCTTTTGTCCCCCCATGCCCTTCCCCAACCCTACTTTTCAGGTGTATATATATATATATATATCCTCTCCTTTATTAATTTATTCAAACTCGATCTCTAGTCTATTTGGGACTAGGGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_225541.p1 GENE.R_Transcript_225541~~R_Transcript_225541.p1 ORF type:complete len:115 (+),score=21.76 R_Transcript_225541:131-475(+)
MASDHPNNNMGNERSGGSSNSSSSNSSGKKVKNKSGGSNSDKPKQPQRGLGVAQLEKIRLHSHASCGFIPSPQHPFCPPMPFPNPTFQVYIYIYISSPLLIYSNSISSLFGTRA*

Click here to download the sequence:
Link to NCBI Protein BLAST