Transcript Information: R_Transcript_225903.p1


Annotated TAIR IDAT5G09790.2
Annotated Gene NameARABIDOPSIS TRITHORAX-RELATED PROTEIN 5
Annotated Gene Symbol(s)ATXR5, SDG15
Annotation TypeOrtholog
Chromosome Positionchr5:3039204-3040970 | Reverse length=379
E-Value1.1E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2322951690648
Replicate 23.1166383430442
Replicate 33.042301086989
Condition 2: 8 Hour
Replicate 13.3795594849062
Replicate 22.8533416932763
Replicate 34.3015535584771
Condition 3: 24 Hour
Replicate 14.1252309862281
Replicate 23.8481831918455
Replicate 33.7619492430605


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_225903.p1 GENE.R_Transcript_225903~~R_Transcript_225903.p1 ORF type:complete len:384 (+),score=56.61,PHD|PF00628.25|1.4e-10,SET|PF00856.24|4.8e-06 R_Transcript_225903:353-1504(+)
ATGCCCCCATCCAGCTCGGCCCAGAAGCTGTACCCCTTCAATGGGACAGTTCACCGGACGGCAGCCACACCGCCGGAAAACACGCCGGTGAAAAAAACAGCTCCGGTGAAAGCAAAGAAGTACAAAACAATGGAGGAAATAATGGCGAAAGCAAAGTATGCAGTGATCGAACGTGAGGATTACTCGGATGTCACGTGCGACGAATGTGGGTCAGGTGATAAACCACACGAGCTTCTCTTGTGTGATAAATGTGATCAAGGGTTTCATATGGGTTGTGTCCGACCCGTCGTTGTTCGGGTCCCTATCGGATCCTGGGTCTGCCCCAATTGCTCCGGTCAGCCACGTGTCAGAAGTTTTTCGCAGAAGAAGATAATAGACTTTTTTAGAATTCAGAAGTGTAAGGGTGTAACTGATGAAGGCTACTCTAGTTCTTCTTCTTCTCAAGATTCGAAAAAGCGTCGAAGAAGACCTGGCACGTTGATTTGTTACAAGAAGAAAAAGAGAAGATTGCTTCCATTCATCCCTACAGAAGATCCAGTTCGAAGGTTGGAACAAATGCGTTCACTTGCTACAGCTTTAACCGCGCTAAAGATGGAATTCAGTAATGAACTAACTTACGTGTCTGACATGGCTCCAAGGGCTGCTAATCAGGCAAAATTTGAGGATGGAGGAATGCAGGTGCTCTCAAAAGAAGATCATGAAACCGTGGAGCAATGCAGATCTATGGCTAGAAGAGGCAAATGTCCACCCCTAGTAGTAGTTTATGACTCACATGAAGGTTTCACTGTTGAGGCTGATGGCCCAATCAAGGATATGACATTCATTGGAGAATATGCTGGAGACGTGGATTACATCAAGAATCGGGAGCTTGATGACTGTGATAGTTTGATGACCCTCCTCCTTGCAACAGACCCATTGAAAAGTCTGGTCATTTGTCCTGACAAACGTGGAAATATTGCTCGCTTCATCAATGGCATCAACAACCACACACCGGAAAGTAGGAAGAAACAGAATCTTAAATGTGTGAGATATGATGTGGATGGTGAATGCCATGTTTTCCTAGTTGCCACCCGCGATATTGCCAAGGGAGAAAGGCTCTACTACGATTATAATGGATACGAGCATGAATACCCTACTCATCATTTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_225903.p1 GENE.R_Transcript_225903~~R_Transcript_225903.p1 ORF type:complete len:384 (+),score=56.61,PHD|PF00628.25|1.4e-10,SET|PF00856.24|4.8e-06 R_Transcript_225903:353-1504(+)
MPPSSSAQKLYPFNGTVHRTAATPPENTPVKKTAPVKAKKYKTMEEIMAKAKYAVIEREDYSDVTCDECGSGDKPHELLLCDKCDQGFHMGCVRPVVVRVPIGSWVCPNCSGQPRVRSFSQKKIIDFFRIQKCKGVTDEGYSSSSSSQDSKKRRRRPGTLICYKKKKRRLLPFIPTEDPVRRLEQMRSLATALTALKMEFSNELTYVSDMAPRAANQAKFEDGGMQVLSKEDHETVEQCRSMARRGKCPPLVVVYDSHEGFTVEADGPIKDMTFIGEYAGDVDYIKNRELDDCDSLMTLLLATDPLKSLVICPDKRGNIARFINGINNHTPESRKKQNLKCVRYDVDGECHVFLVATRDIAKGERLYYDYNGYEHEYPTHHFL*

Click here to download the sequence:
Link to NCBI Protein BLAST