Transcript Information: R_Transcript_226030.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89942126443542
Replicate 20.36515305071823
Replicate 30.82995426073016
Condition 2: 8 Hour
Replicate 10.70973521586218
Replicate 20.25925660105722
Replicate 30.52613364117064
Condition 3: 24 Hour
Replicate 10.46581058143168
Replicate 20.38356971983613
Replicate 30.76131146737034


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_226030.p1 GENE.R_Transcript_226030~~R_Transcript_226030.p1 ORF type:complete len:690 (+),score=62.08,RVT_3|PF13456.2|6.4e-16,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|1.5e-15 R_Transcript_226030:199-2268(+)
ATGTTGTGTATCTATGTCATTAGAAGAGTACTTTTCCCTGAAGCAAGTGAAGAGCAGTTTCATGTAATCGACTACTGTCTCCAAAAATTTTGTGGGGCATCAGGGGAGCAAGTGAATTATGCCAAGTCAACCATATGCTTCTCCAAAGGCGTCAGTGATGCTGTTATCGATTCTATTGCTCAAGCAAGTGGTATGGAAATAACCCAAGACCTTGGCAAATACTTGGGGATGCCTACTGACAGACACATGTCTCGTGCTTCATTTCAACACCTGCTTGACAGGGTGAATGCAAGACTTGAGGGATGGCAAACAAAGTATCTCTCCATGGCAGGGCGCGTAACTTTGGCGAAGTCGACTCTATCAAGCATCCCTTATTATTCAATGCAAACTGCCCTGCTCCCAAGGGCGGTTTGTGATGAGATTGACAAAAAAACACGAAGGTTCATTTGGGGCAGCAAAGAAGGAGAAAAGAAAATTCACCTGGCAAACTGGTCCCTGGTCACACAACCAAAGGAAAGAGGGGGCCTGGGTATACGGTCTATGCGGCAGGCCAACACGGCTTTTCTTGCAAAGCTTGGTTGGAGAACGTTAACCGAACCTGGGAGTCTCTGGTCCCGTGTTTTAAGGAGCAAGTACTGTGCTGGGAGATGCGACATCGACATGTTCGCGGAGCATCGAAGTATGTCTAACACTTGGAAAGGTATCACGCATGCAGCATCCACTATTCGCAAAGGTGTTCGAGCTATAATTGGTAATGGGCAACGAACTTTCTTCTGGCTCCACCATTGGGTCGTAGACCACCCACTCGAACATGATGCATCCCAGACCCTCAACGAGGATGAGCTAGGCAAAACAGTCGCGGATTATTGGGATGGGGAACAGTGGATGTGGGATCAGTTCTCTCACCTCCTCCCTCCCAATATCCTTCAAAAAATAGCTTCACTACATGTGATTAACAAGTCAGGAGCTCAAGACAGCCTCTCTTGGGGGGGCACTAGTAATGGCGAGTGCACGATTACGTCAGCATTGGAAATTATTAGGATGGATGATGATGGGTCATATAATCCCTTATGGAAGAAGTTGTGGGCTGTTTCTGCATCACAGAGAATACGCAACTTCCTATGGCTTTGTATGCATGATAGCATCCTATCCAATGCTAACCGTGCACGAAGAAATTTAACTACTGATGCCTCGTGTCGAGAATGTAACCATCACGAAGAATCAACCCTTCATATTCTTCGTGATTGCCCTCATGCCAAGAATATCTGGGCGCAACTAATCCCACACCAGGAATTGGAGCGTTTCATGAGGGCTCCCCTACCAGAATGGATAGCTGCTAATATAACCCCAACGGATGACTGGGCGACACTCTTTGCCTATGCTATTTGGTGGTTGTGGCGATGGAGAAATTGTAGAACTATGGGTGATGCAAATGATATCCCTGATAGGGGTGCCGAGTTCATCCAAGCCAAGGCGACAGAGTATTTGGAAGCGAACTCGAAGCGGGTCGCGAAACTGCAAGGTATAAAGCGGCCTCGGGCTGAAGCGTTCATCTCATGGCAAGCTCCTCCAATGGGATGGACTAAACTCAATACCGACGGCGCGGCAAAGGGTAATCCTGGAGCTGCGGGAGGGGGAGGCATTTTTCGTGCCTCTAATGGTGCCTTCATGAAGGCTTATACTGTCAAGCTAGGCACTTGTACAGCTTTCGAGGCGGAATTGCAAGCCATATTCCATGGCCTGAAGTTCTCCCAACAGATGGGCATTACTCAACTAGTTCTTGAAACTGACTCCGAGTTGGCCCACGATATGCTCATCCATACAACACCACCACACAGCCCGTATTACTTTCTGCTGGAATGCTGCAAGGAACTCATTAATGGCCCTGGAATCAAAGTGCAAATTCACCACGTCTACCGAGAGGCAAATGCAGCGGCTGATTGGCTAGCTAACTTGAGTTTTACTTTACTAGACTTCATTTGTGTTTTTAATGCTCCCCCTCCTAGTATGATAGATGTACTCTTCCAAGACCAGATTGGTGTTGCGAGGCCTAGGCAAATTAGAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_226030.p1 GENE.R_Transcript_226030~~R_Transcript_226030.p1 ORF type:complete len:690 (+),score=62.08,RVT_3|PF13456.2|6.4e-16,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|1.5e-15 R_Transcript_226030:199-2268(+)
MLCIYVIRRVLFPEASEEQFHVIDYCLQKFCGASGEQVNYAKSTICFSKGVSDAVIDSIAQASGMEITQDLGKYLGMPTDRHMSRASFQHLLDRVNARLEGWQTKYLSMAGRVTLAKSTLSSIPYYSMQTALLPRAVCDEIDKKTRRFIWGSKEGEKKIHLANWSLVTQPKERGGLGIRSMRQANTAFLAKLGWRTLTEPGSLWSRVLRSKYCAGRCDIDMFAEHRSMSNTWKGITHAASTIRKGVRAIIGNGQRTFFWLHHWVVDHPLEHDASQTLNEDELGKTVADYWDGEQWMWDQFSHLLPPNILQKIASLHVINKSGAQDSLSWGGTSNGECTITSALEIIRMDDDGSYNPLWKKLWAVSASQRIRNFLWLCMHDSILSNANRARRNLTTDASCRECNHHEESTLHILRDCPHAKNIWAQLIPHQELERFMRAPLPEWIAANITPTDDWATLFAYAIWWLWRWRNCRTMGDANDIPDRGAEFIQAKATEYLEANSKRVAKLQGIKRPRAEAFISWQAPPMGWTKLNTDGAAKGNPGAAGGGGIFRASNGAFMKAYTVKLGTCTAFEAELQAIFHGLKFSQQMGITQLVLETDSELAHDMLIHTTPPHSPYYFLLECCKELINGPGIKVQIHHVYREANAAADWLANLSFTLLDFICVFNAPPPSMIDVLFQDQIGVARPRQIRM*

Click here to download the sequence:
Link to NCBI Protein BLAST