Transcript Information: R_Transcript_22663.p1


Annotated TAIR IDAT1G72370.1
Annotated Gene Name40s ribosomal protein SA
Annotated Gene Symbol(s)P40, AP40, RP40, RPSAA
Annotation TypeOrtholog
Chromosome Positionchr1:27243148-27244842 | Reverse length=298
E-Value6.1E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1550.5659158561
Replicate 2613.38389932747
Replicate 3575.11835836329
Condition 2: 8 Hour
Replicate 1496.06791097668
Replicate 2490.20553533658
Replicate 3515.23395279687
Condition 3: 24 Hour
Replicate 1632.44461996534
Replicate 2652.75310336845
Replicate 3557.90237641763


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22663.p1 GENE.R_Transcript_22663~~R_Transcript_22663.p1 ORF type:5prime_partial len:374 (+),score=104.93,Ribosomal_S2|PF00318.16|2.1e-09,Ribosomal_S2|PF00318.16|2.1e-11 R_Transcript_22663:2-1123(+)
GGGGGAAAAAAAATTCTCCATCTTGGGCCCGTGGCCCTTTATCTCATAAGGACGACTAGGGTTTATCGTTCCTCACAATATTTGCCCACTTCTTGCCACATTCTTCACCTCTGCCGGGACTCAAAACTCTCTCCGCAGACAAAGAGCAGAGAAACTCTCGGCAAAGCAAAAATGGCGACAAATGGGGTACCAAGAGCTTTGTCTCAGAAAGAAGAAGACATCCTGATGATGCTTGCTGCCGATGTTCATCTTGGCACCAAAAACTGTGACTATCAGATGGAACGTTATACTAATAGCCGCCGCACTGATGGTATTTACATTATTAATCTTGGAAAGACCTATGATAAAATGGTGCTGGCCGCTAGGACTATTGTGGCCATTGAGAATCCTCAGGACATCATTGTCCAGTCAGCCAGACCCTATGGTCAGAGAGCTGTGTTGAAGTTCGCCCAGTACACTGGGGCCCAGGCAATTGCAGGAAGACACACTCCTGGAACCTTCACCAATCAGCTCCAGACTTCCTTCTGCGAGCCTCGCTTGCTGATTCTGGCTGACCCACGTACTGATCACCAGCCCATCAAAGAAGGAGCACTTGGGAACATCCCAACCATTGCTTTCTGTGACACTGATTCCCCAATGCGTTATGTTGACATTGCCATCCCCGCAAATAACAAAGGAAAGCACAGCATTGGCTGCCTGTTTTGGATGCTTGCAAGAATGGTTCTTCAGATGCGTGGAACTATTCGTCCTGGACAGAAATGGGATGTGATGGTTGACTTGTTCTTCTACAGAGAGCCAGTGGAGACCGAAGTAAAGGAGGAAGAGGAAGCTGTTGTTGCTGATTATGTTCCTGATTTTGGTGCCCCTGCTCTTGGTGGTGACCAATGGACTTCAATTTCAGAGGGACAATGGGGTGCAGAGGTGGCTGCTCCTGCTCCTATTCCTGCTGTTCCCAGTGTGGACTGGGCTGGTGTTCCAGCTCAACCTGCTGCGGCTGGTGATGGTTGGGATGAGGCTCCAGCTCCAGCTCCAGCTCCTGCTCCAGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCAACTGCAGCTGCAGTTCCAGCACCTACTGGCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22663.p1 GENE.R_Transcript_22663~~R_Transcript_22663.p1 ORF type:5prime_partial len:374 (+),score=104.93,Ribosomal_S2|PF00318.16|2.1e-09,Ribosomal_S2|PF00318.16|2.1e-11 R_Transcript_22663:2-1123(+)
GGKKILHLGPVALYLIRTTRVYRSSQYLPTSCHILHLCRDSKLSPQTKSRETLGKAKMATNGVPRALSQKEEDILMMLAADVHLGTKNCDYQMERYTNSRRTDGIYIINLGKTYDKMVLAARTIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQTSFCEPRLLILADPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIAIPANNKGKHSIGCLFWMLARMVLQMRGTIRPGQKWDVMVDLFFYREPVETEVKEEEEAVVADYVPDFGAPALGGDQWTSISEGQWGAEVAAPAPIPAVPSVDWAGVPAQPAAAGDGWDEAPAPAPAPAPAPAPAPAPAPAPAPTAAAVPAPTGW*

Click here to download the sequence:
Link to NCBI Protein BLAST