Transcript Information: R_Transcript_22667.p1


Annotated TAIR IDAT3G15410.2
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5203380-5207279 | Forward length=590
E-Value1.5E-287
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.340880500709
Replicate 223.846313703046
Replicate 327.747852242762
Condition 2: 8 Hour
Replicate 120.194527791542
Replicate 223.974553726632
Replicate 323.516004137065
Condition 3: 24 Hour
Replicate 123.549503290274
Replicate 224.518475089697
Replicate 323.542445247419


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22667.p1 GENE.R_Transcript_22667~~R_Transcript_22667.p1 ORF type:complete len:582 (+),score=111.09,LRR_8|PF13855.2|8.2e+02,LRR_8|PF13855.2|3.2e-10,LRR_8|PF13855.2|5.3e-05,LRR_8|PF13855.2|1.4e-06,LRR_8|PF13855.2|2e-07,LRR_8|PF13855.2|2.3e-08,LRR_8|PF13855.2|2.4e-05,LRR_8|PF13855.2|8.1e-09,LRR_8|PF13855.2|3.2e-12,LRR_8|PF13855.2|2.7e-05,LRR_8|PF13855.2|1.2e+02,LRR_4|PF12799.3|3.2e+03,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|3.5e-05,LRR_4|PF12799.3|0.0027,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|0.0003,LRR_4|PF12799.3|0.065,LRR_4|PF12799.3|0.0045,LRR_4|PF12799.3|6.6,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|4.6e-05,LRR_4|PF12799.3|0.0031,LRR_4|PF12799.3|9.3e-06,LRR_4|PF12799.3|0.011,LRR_1|PF00560.29|6.1e+03,LRR_1|PF00560.29|5.5e+02,LRR_1|PF00560.29|4.8,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|38,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|5.4e+03,LRR_1|PF00560.29|9.2e+02,LRR_1|PF00560.29|16,LRR_1|PF00560.29|30,LRR_1|PF00560.29|0.88,LRR_1|PF00560.29|3.8e+03,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|7.7e+02,LRR_1|PF00560.29|7.4,LRR_1|PF00560.29|49,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|0.077,LRR_1|PF00560.29|6.5,LRR_1|PF00560.29|1.1e+02,LRR_5|PF13306.2|0.056,LRR_5|PF13306.2|86,LRR_5|PF13306.2|28,LRR_5|PF13306.2|5.2 R_Transcript_22667:145-1890(+)
ATGGATCGGATGCTAAAGGCTGCCAGGACTTCTGGGTCACTCAATTTATCCAATCGCTCATTAAGGGACGTTCCTGATGAAGTGTATCAAAATTTTGATACTGCTGGGGATGGTGATAAATGGTGGGAGGCTGTTGACCTACAAAAGCTCATTTTGGCACATAACAATATTGAAGTATTGAAAGAAGACCTGAAAAATTTGCCTTTGTTAACCGTATTGAATGTTAGCCACAACAAGCTTACCCAACTTCCTGCTGCGATTGGAGAGCTTCCCTCACTGAAATCACTTGACGTGTCATTTAACTCAGTTGCAAACATACCTGTAGAGATTGGATCAGCGTCTTCTCTGGTCAAGATTGATTGTTCAAACAACCAGCTTACAGGGCTGCCAAATTCTCTTGGACAATGTTCAGAATTATCTGAGCTCAAGGCATCAAATAATTGCATTACAAGCTTACCTGAAGATTTGGTGCACTGTACTAAGTTAGTGAAAGTGGAAATAGAGGGCAACAAGCTCACAGAGCTCTCAGATCCTCTGATTGCATCATGGAGCAAGCTCACTGAACTCAATGCTTCAAAAAACCTGTTGAATGGTGTACCAGAGAGCATTGGGAGCCTTTCACGCCTTATACGCCTTGACCTGCACCAGAACAGAATTTCATCAATCCCCTCATCTTTAAAAGGATGCTCTTCCCTTGTAGAATTCTATATGGGGTGCAATATGTTGTCGTCATTACCAGCAGAGCTCGGAGAGCTATCTAAATTAAGTACACTGGATCTACGTTCAAACCAGTTAACTGAATACCCTGTGGAGGCTTGCAAATTGCACTTATCTGTACTTGATCTGTCAAACAATTCGTTATCTGGCCTGCCTGCAGAAATTGGATTGATGAGAAGTTTAAGAAAGCTTGTGCTTGTTGGCAATCCTATGCGAACCATTAGAAGCACATTGGTATCTGGGCCTACACCTGCTTTATTGAAGTATCTTCGAAGTAGACTACCTTCTGCACAAGAGGCCGAAGCAATGACTCCAAGTAAAGATGACATGGTTGCTATGGCAGCTCGGATGTCTCTAAGTTCAAAGGAACTTTCACTAGGAGGGATGGACTTGACTTCTGTTCCCCCAGAGGTCTGTGCATCAAATGAATTAACAAAAGTAGACCTTTCAAGGAATTCGATTGAAGAGCTACCTCTTGCACTGTCGTCATGTTCTTCCCTTGAGGTTCTGATTTTATCCAGGAACAAGATCAAGGATTGGCCTGTGGAAGTTCTGCAGTCACTTCCTAGTCTCATATGCTTAAAGCTCGACAATAATCCCCTTAGACAGATTCCATTGAACGGGTTTGAAGCTGTTTCTGGACTCCAAATTTTGGACCTTAGTTTCTGTGTAGGTTCATTATCTGGGAATCCAGCCTTTGCTAGCTTACCACATCTGCAGGAGCTATACCTCAGGCGAGTGCAGTTGCGTGAAGTGCCATCAGATATTTTGAGGTTGCAAAAGTTGCAAATTCTTGACCTTGGTCAAAATTCGCTGACTTTTATTCCAGAGGGATTCCAAAATCTTACATCTCTGACTGAGCTGGACCTTACAGATAATAGCATCACAGCATTACCGCCAGAGCTGGGCTTGCTTGAAATCAGCCTACAAGCTCTCAGACTTGATGGAAACCCCTTGAGAAGCATTAGAAGGACAATTTTGGATCGAGGGACCAAAGCTATTCTGAAGTATTTGAAAGACAAAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22667.p1 GENE.R_Transcript_22667~~R_Transcript_22667.p1 ORF type:complete len:582 (+),score=111.09,LRR_8|PF13855.2|8.2e+02,LRR_8|PF13855.2|3.2e-10,LRR_8|PF13855.2|5.3e-05,LRR_8|PF13855.2|1.4e-06,LRR_8|PF13855.2|2e-07,LRR_8|PF13855.2|2.3e-08,LRR_8|PF13855.2|2.4e-05,LRR_8|PF13855.2|8.1e-09,LRR_8|PF13855.2|3.2e-12,LRR_8|PF13855.2|2.7e-05,LRR_8|PF13855.2|1.2e+02,LRR_4|PF12799.3|3.2e+03,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|3.5e-05,LRR_4|PF12799.3|0.0027,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|0.0003,LRR_4|PF12799.3|0.065,LRR_4|PF12799.3|0.0045,LRR_4|PF12799.3|6.6,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|4.6e-05,LRR_4|PF12799.3|0.0031,LRR_4|PF12799.3|9.3e-06,LRR_4|PF12799.3|0.011,LRR_1|PF00560.29|6.1e+03,LRR_1|PF00560.29|5.5e+02,LRR_1|PF00560.29|4.8,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|38,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|5.4e+03,LRR_1|PF00560.29|9.2e+02,LRR_1|PF00560.29|16,LRR_1|PF00560.29|30,LRR_1|PF00560.29|0.88,LRR_1|PF00560.29|3.8e+03,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|7.7e+02,LRR_1|PF00560.29|7.4,LRR_1|PF00560.29|49,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|0.077,LRR_1|PF00560.29|6.5,LRR_1|PF00560.29|1.1e+02,LRR_5|PF13306.2|0.056,LRR_5|PF13306.2|86,LRR_5|PF13306.2|28,LRR_5|PF13306.2|5.2 R_Transcript_22667:145-1890(+)
MDRMLKAARTSGSLNLSNRSLRDVPDEVYQNFDTAGDGDKWWEAVDLQKLILAHNNIEVLKEDLKNLPLLTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNSVANIPVEIGSASSLVKIDCSNNQLTGLPNSLGQCSELSELKASNNCITSLPEDLVHCTKLVKVEIEGNKLTELSDPLIASWSKLTELNASKNLLNGVPESIGSLSRLIRLDLHQNRISSIPSSLKGCSSLVEFYMGCNMLSSLPAELGELSKLSTLDLRSNQLTEYPVEACKLHLSVLDLSNNSLSGLPAEIGLMRSLRKLVLVGNPMRTIRSTLVSGPTPALLKYLRSRLPSAQEAEAMTPSKDDMVAMAARMSLSSKELSLGGMDLTSVPPEVCASNELTKVDLSRNSIEELPLALSSCSSLEVLILSRNKIKDWPVEVLQSLPSLICLKLDNNPLRQIPLNGFEAVSGLQILDLSFCVGSLSGNPAFASLPHLQELYLRRVQLREVPSDILRLQKLQILDLGQNSLTFIPEGFQNLTSLTELDLTDNSITALPPELGLLEISLQALRLDGNPLRSIRRTILDRGTKAILKYLKDKI*

Click here to download the sequence:
Link to NCBI Protein BLAST