Transcript Information: R_Transcript_226995.p1


Annotated TAIR IDAT3G24110.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8704429-8705413 | Reverse length=229
E-Value1.7E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1043146638951
Replicate 24.9551268982463
Replicate 36.5055134773073
Condition 2: 8 Hour
Replicate 13.3300776328254
Replicate 24.1144022587782
Replicate 33.3398963541512
Condition 3: 24 Hour
Replicate 16.4281860237572
Replicate 23.3523993513678
Replicate 34.1148884811367


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_226995.p1 GENE.R_Transcript_226995~~R_Transcript_226995.p1 ORF type:complete len:250 (+),score=52.66,EF-hand_1|PF00036.28|9.8e-05,EF-hand_1|PF00036.28|0.0013,EF-hand_1|PF00036.28|0.0002,EF-hand_1|PF00036.28|0.00013,EF-hand_6|PF13405.2|0.00023,EF-hand_6|PF13405.2|0.0086,EF-hand_6|PF13405.2|0.00027,EF-hand_6|PF13405.2|0.0059,EF-hand_7|PF13499.2|6.7e-10,EF-hand_7|PF13499.2|1.7e-06,EF-hand_8|PF13833.2|4.9,EF-hand_8|PF13833.2|4.3e-08,EF-hand_8|PF13833.2|0.49,EF-hand_8|PF13833.2|0.00035,EF-hand_5|PF13202.2|0.082,EF-hand_5|PF13202.2|0.63,EF-hand_5|PF13202.2|0.075,EF-hand_5|PF13202.2|0.015,SPARC_Ca_bdg|PF10591.5|0.0056,SPARC_Ca_bdg|PF10591.5|0.33 R_Transcript_226995:230-979(+)
ATGAAAATGAAAATGAAGATCAAGTCCTACTTGACAGGCTGCTTGCTTTGTGGTCGTAACCTTAATGATACAAATACAGACAAATATAAAAGGTTGGACGCCAAATTGGAAAGGAAAATGCTCGAGCTCAGAAGAATAAGAGCTTCAGCCCATAAAAATCTAAGAACAATTAATAGTATTATCATCAAGTTTCCTCGCTTGAAACAAGATATCAGAAACCTCAGAGGTGTCTTCGAGCATTATGATGAAGACTGCAACGGAATTATTGATCGCGAGGAGCTTGAGAAATGCTTCAAGGAATTGCAAGTCAATGATCTTAAAGAGCAGGAGATTGATGATCTTTTTCATTCGTGTGACGTTGATAGGAGTGGGGGAATACAATTCAATGAGTTCATTGTTCTCCTCTGCCTCATTTACCTCCTGCATAAACAACCTGATTCCCGCTCTTCTGCTGACACTACGTTGTCATCAAGGTTGGGATCGCCTCAGCTGGAAGCAACCTTTGACACAATTGTGGAAGCTTTCTTTTATATGGATAAAAATGGGGATGGTAAACTCAACAAAAAAGACATGGTCATGGCTTTGAAAGATGCTCCTTGGGAGAAATCACCTGCACATGTCACCAACACCAGATTCATGGAGATGGACAGGGACAAAGACGGGAATGTCAGTTTCAGGGAGTTTCTTTTCGCTTTAACTAGTTGGCTTGGGATCGAGTCTGATGATGACATTCCTGTTACTGGAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_226995.p1 GENE.R_Transcript_226995~~R_Transcript_226995.p1 ORF type:complete len:250 (+),score=52.66,EF-hand_1|PF00036.28|9.8e-05,EF-hand_1|PF00036.28|0.0013,EF-hand_1|PF00036.28|0.0002,EF-hand_1|PF00036.28|0.00013,EF-hand_6|PF13405.2|0.00023,EF-hand_6|PF13405.2|0.0086,EF-hand_6|PF13405.2|0.00027,EF-hand_6|PF13405.2|0.0059,EF-hand_7|PF13499.2|6.7e-10,EF-hand_7|PF13499.2|1.7e-06,EF-hand_8|PF13833.2|4.9,EF-hand_8|PF13833.2|4.3e-08,EF-hand_8|PF13833.2|0.49,EF-hand_8|PF13833.2|0.00035,EF-hand_5|PF13202.2|0.082,EF-hand_5|PF13202.2|0.63,EF-hand_5|PF13202.2|0.075,EF-hand_5|PF13202.2|0.015,SPARC_Ca_bdg|PF10591.5|0.0056,SPARC_Ca_bdg|PF10591.5|0.33 R_Transcript_226995:230-979(+)
MKMKMKIKSYLTGCLLCGRNLNDTNTDKYKRLDAKLERKMLELRRIRASAHKNLRTINSIIIKFPRLKQDIRNLRGVFEHYDEDCNGIIDREELEKCFKELQVNDLKEQEIDDLFHSCDVDRSGGIQFNEFIVLLCLIYLLHKQPDSRSSADTTLSSRLGSPQLEATFDTIVEAFFYMDKNGDGKLNKKDMVMALKDAPWEKSPAHVTNTRFMEMDRDKDGNVSFREFLFALTSWLGIESDDDIPVTGD*

Click here to download the sequence:
Link to NCBI Protein BLAST