Transcript Information: R_Transcript_22759.p1


Annotated TAIR IDAT3G13300.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)VCS
Annotation TypeOrtholog
Chromosome Positionchr3:4304085-4309949 | Forward length=1344
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.797581431314
Replicate 222.598609879313
Replicate 327.623315675706
Condition 2: 8 Hour
Replicate 127.041984758153
Replicate 231.118491431974
Replicate 341.935578459915
Condition 3: 24 Hour
Replicate 138.676219519674
Replicate 230.13742359562
Replicate 337.834686071447


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22759.p1 GENE.R_Transcript_22759~~R_Transcript_22759.p1 ORF type:complete len:1389 (+),score=345.55,Ge1_WD40|PF16529.1|5.9e-17,WD40|PF00400.28|0.34,WD40|PF00400.28|0.38,WD40|PF00400.28|6.3e+02 R_Transcript_22759:478-4644(+)
ATGGCTTCGACTGGGAATCCAAATCAACAGCAGCAACAGCAAGGAGGGGGAGGGGGAGGTTTTGATATGAACAAATTCTTTAAACCTAATACTACAAACTTACCATCACCAACAACGAGTACGACTTCCCAAAACCCTAACAATAACAATTTGGGGGCCACGTATGCAGCACCAGCACTATCCCCATCACCATCACCATCACCATCAGCTTCTTACCCTCCTCCTACGGGACCTTACTCTTATCCTCCTCAAACCACTGTTTATTACCCCCATAATCACAATCATATGCCTCCCACTCCTTTCACACAACCTCAAGACCACCACCACCACCCTAACTTCAATCACACCCAAAGATCAGTCTCATTTCCTACACCCCCTCTTCAACCTCCTCACCCAAACCCTAACCCTAACCCCGGTGCTCGTCTCATGGCTTTGCTTAGTAGCCCCCCTCCCAATTTTGATTACTCCCACCAACAACAGCAACATCAGCCTGTCACTCCTTTACCCCCGCCGCCTTCTTCATCCGTGTCCGTCCCTGTGCCCCTCAGTGCCCCCCCTGTTCATGGTGCTATTCATTCCGCCATGTCTCAGCCTGCCCCCATGCGTTTGCCTAGCAGTAAGCTCCCACGTGGTCGCCATTTGGTTGGTGATCATGTTGTTTATGATGTTGATGTTAGGCAGTTAGGTGAAGAACAGCCTCAGCTTGAGGTTACCCCTATCACTAAGTATGTCTCCGATCCTGGCCTCATCCTCGGCCATCAGATTGCTGTTAACAAGACTTACATTTGTTATGGCCTTAAGCTGGGTGCCATTCGTGTCCTTAATATTAACACCGCACTCAGGTCTCTACTCCGTGGACACACTCAGAGGGTCACAGATATGGCCTTTTTTGCAGAAGATGTTCATCTATTGGCTAGTGCAAGTATTGATGGACGGGTATATGTATGGAAAATATCTGAAGGTCCAGATGAGGAAGAAAAGCCACAAATTTCTGGAGTTGTCGTGCTTGCTATTCATATTACTGGGGATGAAGGATCTATTCATCCACGGGTTTGTTGGCACTGTCACAAACAAGAGATATTGGTTGTAGCCATTGGTAAAAGTGTCCTGAGGATTGATACCACTAAAGTAGGCAGAGGTGTTGAGTTCGTTGCAGAGGAGCCTCTTGAGTGTCCTATGGACAAGCTGATTGATGGGATCCAACTTGTTGGTAAACATGAAGGGGAGGTCACTGATTTATCAATGTGCCAATGGATGACCACTCGTTTAGTTTCAGCTTCCAAGGATGGAATGATTAAGATCTGGGAAGATCGCAAGGCTCTCCCGCTTCTAGTACTGAGGCCCCATGATGGCCAGCCTGTTGATGCGGCTAAGTTTTTGGCTGCTCCTCATCGTCCTGATCACATCATGCTCATCACAGCGGGACCACTTAATCGAGAGGTAAAGCTTTGGGCTTCATCAGATGAAGAAGGATGGTTGCTGCCCAGTGATGCTGAATCATGGCGGTGTATACAGACATTGGAACTGAAGAGTTCCGCTGAGCCGCGGAATGAGGAAACGTTCTTTAATCAAGTCGTGGCATTGTCTCAAGCAGGGCTTTTGTTACTCGCAAATGCTAAAAAGAATGCAATTTATGCAATACACTTAGAATATGGTCCCAACCCAGCTGCTACCCGCATGGATTACCTAGCAGAGTTCACTGTTACCATGCCTATCTTGAGCTTTACTGGGACAAGTGATGTCTTATTTCATGGAGAACACCTAGTACAGGTATATTGTGTGCAGACACAAGCCATACAGCAGTATGCATTGGACCTCTCACAGTGTCTGCCGCCACCAATGGAGAATATGGGTTTGGAGAAGTCAGAGTCCACTGTGTCTCGTGAAGCAGTGGAATGTATTCCTGCCTTAGAATCATCAGGAAGCAAATCTTTTGAGGTTCCTTTTTCTGCACCCAAACCAAGTAGTTCGCCTGACATTAAGTGTCCTGTGACCGCTGCTTCCGATGCAGCCATTACGCAGGAGATGAACACCTCCAATATGGATTCCAACACTGCTTCGTTGCTATCAACATCAAGCCATGCGGATGTTGTCTCTGTTGCATCTCCACCTCTTCCCCTTAGTCCAAGGTTATCTAGAAAGCTTAGTGATATTCGTGGCGAACAGGCTGTTACTGATTATCCAGTGGACAGGCAGATGGATAGTGCGCAGGCAAGTTCTGGTGCTCTGCCCTCTCCGAATGATGAGAACAGAACTATACAAGGGACTGCTTCTGATGTAGCTCCACCTGTCATGTTCAAACATCCAACCCATCTGATTACCCCCTCTGAGATCATGGCTACATCGTCAGGCGATACTACTCGTGCTGCTGAGAAGGGCGAGACTGAGGCTAAGATTCAAGATGTAGTTGTCAGCAATGATGGGGGAAATGTCGAAGTTGAGGTTAAAGTTGTAGGTGAAACAAGATTTGCTAATAATGATGAGGCCACCTCTCAGGTAGATCCTCAAATTGTGAGAGAAAGGAAGGAAAAGTTTTACTCCCAAGCATCTGATCTTGGGGCTGATATGAGCCGAGAGTGCTGTGCTTTACCATCTCAAACCTCTGGCATGGAAGAAGCTAGAAATAGCATAATGGAGGCTCTAGTACAACCTTCGAATTCTGGTGAGGAGGAAGAGGAAGAAGCCAGCAATGATATGTCTGGGAAAGTCACTGACTTTGCTGTGTCAGCTGCAGTTCCACAGTCTCCAGTGCCAGCTGGCAAAGGAAAAAAGCAGAAAGGGAAGATTGCTCAAGCATCTGGTTCATCATCTCCTTCTCAGAGTGTCTCTAACTCAGCAGAACTGTTGCAAGGGACTGTTACAGGTTCGAGCGCACCATCTGTGGACTTCCCACAAATTCAGGAAATGTTTAATCAGCTATTAGCTTCTCAGAAAGAAATGCAGAAGCAGGTGAGCATGATGGTTGCTGTACCAGTTACTAAAGAAGGTAGAAGACTAGAGGCAGCTCTTGGACGAAACATGGAAAAGGCTGTAAAGGCAAACACAGATGCTCTATGGGCACGTATACAAGAGGAGAATGCTAAACATGAAAAGCTGTTACGAGAGCGTACTCAACAAATAACAGGGTTGATAAATAACTTTGCCAACAAAGACTTGCTTGGCGTGCTGGAGAGAACAGTCAAAAAAGAATTGGCTTCAGTTGGTACAAGCATAGCTCGAACAGTAACTCCAGTTATTGAGAAAACTATTTCTTCATCTATATCTGAATCCTTTCAGAGAGGAGTTGGTGACAAGACAGTGAGTCAACTTGAAAAGTCTATTGCTTCAAAAGTGGAAGCTACAGTTGCCAGGCAAATCCAAGCTCAGTTCCAGACCTCTGGAAAACAAGCACTTCAGGATGGATTGAAGTCTACTTTAGAGGCCTCTATAATTCCTGCTTTCGAAATGTCATGCAAAGCAATGTTTGAGCAAGTTGATGCTGCATTTCAAAAGGGAATGGCAGAACATACAGCAGCAGCGCAGCATCAGATTGAATCAACTCATTCTCACCTAGCACTTGCCTTGAGGGATGCTCTCAATTCAGCATCTTCACTCACCCAATCTTTGAGTGGAGAACTGGCTGATGGTCAAAGGAAGTTGTTAGCTCTTGCAGCTGCTGGAGCAAATCCAAAGCAAGGAAATTCCTTGGTGACTCAACTGAGCAATGGACCTTTGGGTGGCCTGCATGACAAGGTTGAGCAGCCATTTGATCCAACAAAAGAGCTATCAAGGCTAATATCTGAGCACAAGTATGAAGAAGCATTTACTGCAGCATTGCAAAGAAGTGATGTATTCATTGTCTCCTGGCTATGTGCACAGGTTGACCTGCAACGGATTTTGTCGACAATCCCTCTCCCGTTGAGTCAGGGTGTATTGCTCTCTCTTCTGCAGCAGCTTGCTTGTGATATAACGAAGGATACAAGCAGAAAGTTGGGATGGATGACGGATGTTGCTGCATGCATAGTCCCGCATGATCCAATGATTGCTGTGCATGTCCGCCCGATTTTGGAGCAGGTTTACCAAATATTAAACCATCAACGAAGCCTCCCAACCACTACAGCTGCAGAATTGTCGAGCATTCGGGTTGTGGTGCATATTATCAACTCTATGTTGATGACATCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22759.p1 GENE.R_Transcript_22759~~R_Transcript_22759.p1 ORF type:complete len:1389 (+),score=345.55,Ge1_WD40|PF16529.1|5.9e-17,WD40|PF00400.28|0.34,WD40|PF00400.28|0.38,WD40|PF00400.28|6.3e+02 R_Transcript_22759:478-4644(+)
MASTGNPNQQQQQQGGGGGGFDMNKFFKPNTTNLPSPTTSTTSQNPNNNNLGATYAAPALSPSPSPSPSASYPPPTGPYSYPPQTTVYYPHNHNHMPPTPFTQPQDHHHHPNFNHTQRSVSFPTPPLQPPHPNPNPNPGARLMALLSSPPPNFDYSHQQQQHQPVTPLPPPPSSSVSVPVPLSAPPVHGAIHSAMSQPAPMRLPSSKLPRGRHLVGDHVVYDVDVRQLGEEQPQLEVTPITKYVSDPGLILGHQIAVNKTYICYGLKLGAIRVLNINTALRSLLRGHTQRVTDMAFFAEDVHLLASASIDGRVYVWKISEGPDEEEKPQISGVVVLAIHITGDEGSIHPRVCWHCHKQEILVVAIGKSVLRIDTTKVGRGVEFVAEEPLECPMDKLIDGIQLVGKHEGEVTDLSMCQWMTTRLVSASKDGMIKIWEDRKALPLLVLRPHDGQPVDAAKFLAAPHRPDHIMLITAGPLNREVKLWASSDEEGWLLPSDAESWRCIQTLELKSSAEPRNEETFFNQVVALSQAGLLLLANAKKNAIYAIHLEYGPNPAATRMDYLAEFTVTMPILSFTGTSDVLFHGEHLVQVYCVQTQAIQQYALDLSQCLPPPMENMGLEKSESTVSREAVECIPALESSGSKSFEVPFSAPKPSSSPDIKCPVTAASDAAITQEMNTSNMDSNTASLLSTSSHADVVSVASPPLPLSPRLSRKLSDIRGEQAVTDYPVDRQMDSAQASSGALPSPNDENRTIQGTASDVAPPVMFKHPTHLITPSEIMATSSGDTTRAAEKGETEAKIQDVVVSNDGGNVEVEVKVVGETRFANNDEATSQVDPQIVRERKEKFYSQASDLGADMSRECCALPSQTSGMEEARNSIMEALVQPSNSGEEEEEEASNDMSGKVTDFAVSAAVPQSPVPAGKGKKQKGKIAQASGSSSPSQSVSNSAELLQGTVTGSSAPSVDFPQIQEMFNQLLASQKEMQKQVSMMVAVPVTKEGRRLEAALGRNMEKAVKANTDALWARIQEENAKHEKLLRERTQQITGLINNFANKDLLGVLERTVKKELASVGTSIARTVTPVIEKTISSSISESFQRGVGDKTVSQLEKSIASKVEATVARQIQAQFQTSGKQALQDGLKSTLEASIIPAFEMSCKAMFEQVDAAFQKGMAEHTAAAQHQIESTHSHLALALRDALNSASSLTQSLSGELADGQRKLLALAAAGANPKQGNSLVTQLSNGPLGGLHDKVEQPFDPTKELSRLISEHKYEEAFTAALQRSDVFIVSWLCAQVDLQRILSTIPLPLSQGVLLSLLQQLACDITKDTSRKLGWMTDVAACIVPHDPMIAVHVRPILEQVYQILNHQRSLPTTTAAELSSIRVVVHIINSMLMTSK*

Click here to download the sequence:
Link to NCBI Protein BLAST