Transcript Information: R_Transcript_227631.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16593600867926
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.16501464200352
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_227631.p1 GENE.R_Transcript_227631~~R_Transcript_227631.p1 ORF type:5prime_partial len:110 (+),score=17.07,gag_pre-integrs|PF13976.2|1.1e-16 R_Transcript_227631:2-331(+)
GCTGAGGCCATTACTGCTGTTGGTGCTAATAAAGCTTCTACTTCTGCTTATATTGTTGAGTCTGTTGATATTTGGCATGCTAGATTAGGACATGTGAATTATGGTTCTATGAAACGATTAAGAAAAATGAACTTGCTTCCTAATCTAACTTCGGATAATAGTAAAAAATGTGAAATCTGTATTGAGGCTAAATTTGTTAAGAAGTCCTTTAATTCAGTGACTGAAAGAAAAACAGAATTGCTTGAGCTAGTTCACACTGATTTAGCGGACTTTAGAAATACAAAAAGTAGAGGTGGAAAACACTACTACAATACTACATCACCTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_227631.p1 GENE.R_Transcript_227631~~R_Transcript_227631.p1 ORF type:5prime_partial len:110 (+),score=17.07,gag_pre-integrs|PF13976.2|1.1e-16 R_Transcript_227631:2-331(+)
AEAITAVGANKASTSAYIVESVDIWHARLGHVNYGSMKRLRKMNLLPNLTSDNSKKCEICIEAKFVKKSFNSVTERKTELLELVHTDLADFRNTKSRGGKHYYNTTSPS*

Click here to download the sequence:
Link to NCBI Protein BLAST