Transcript Information: R_Transcript_227635.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.095565240600622
Replicate 20.21985654886176
Replicate 30
Condition 2: 8 Hour
Replicate 10.38459473739129
Replicate 20.23414535959357
Replicate 30.19006922115589
Condition 3: 24 Hour
Replicate 10.60098971800273
Replicate 20.23094511927306
Replicate 30.22919062499369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_227635.p1 GENE.R_Transcript_227635~~R_Transcript_227635.p1 ORF type:internal len:191 (+),score=27.09,gag_pre-integrs|PF13976.2|8.5e-16,rve|PF00665.22|2e-11 R_Transcript_227635:2-571(+)
GCTGAGGCCATTACTGCTGTTGGTGCTAATAAAGCTTCTACTTCTGCTTATATTGTTGAGTCTGTTGATATTTGGCATGCTAGATTAGGACATGTAAATTATGGTTCTTTAAAACGTTTGAGAAAAATGAACCTGCTTCCTAATCTAACTTCGGATAGTAGTAAAAAGTGTGAAATCTGTGTTGAGGCTAAGTTTGCTAAGAAGTCCTTTAATTCTGTAACTGAGAGAAAAACGGAATTGCTTAAGCTTGTTCATACTGATCTAGCGGACTTTAGAAACACAGAAAGTAAAGGTGGTAAACACTACTACATCACCTTCATAGATGACTATTCGAGGTATTACAAAGTTTACCTGTTAAGAATAAAAAATGAGGTTGAAACTATGTTCTTAAGGTATAAGGCAGAGGTAGAAAACCAAATGGATAGAAAAATCAAGAGGCTTAGGTCTGACCGGGGTGGTGGGCTTAGGTCTGACCGGGGTGGTGAATACGGAACTATGTTCCTTAAGGAGTTGTGTGAAAAGGAGGGAATAATACATGAACTCTTCCCTCCTAGAACACCCGAACAGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_227635.p1 GENE.R_Transcript_227635~~R_Transcript_227635.p1 ORF type:internal len:191 (+),score=27.09,gag_pre-integrs|PF13976.2|8.5e-16,rve|PF00665.22|2e-11 R_Transcript_227635:2-571(+)
AEAITAVGANKASTSAYIVESVDIWHARLGHVNYGSLKRLRKMNLLPNLTSDSSKKCEICVEAKFAKKSFNSVTERKTELLKLVHTDLADFRNTESKGGKHYYITFIDDYSRYYKVYLLRIKNEVETMFLRYKAEVENQMDRKIKRLRSDRGGGLRSDRGGEYGTMFLKELCEKEGIIHELFPPRTPEQN

Click here to download the sequence:
Link to NCBI Protein BLAST