Transcript Information: R_Transcript_227694.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38027001988997
Replicate 20.65613438800932
Replicate 30.23861184995992
Condition 2: 8 Hour
Replicate 10.51012218640094
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.23914382528858
Replicate 20.22974228011018
Replicate 30.91198769528739


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_227694.p1 GENE.R_Transcript_227694~~R_Transcript_227694.p1 ORF type:5prime_partial len:96 (+),score=10.46,zf-RVT|PF13966.2|2.8e-07,zf-RVT|PF13966.2|1.5e+03 R_Transcript_227694:1-288(+)
AGGCGGCCTCAATGGTGCCTTTCACCTGATAGGTGTCTCATGTGTCACAGGAGTGGGGAGACGGCTTCTCACCTTTTTCTCCATTGTCCTGTTGCGCGGTCTGTTTGGGCCATGCTCTTTGATGTGCGGGGGGAAACCCTAGTTTGTCCGTCTACAGTTTTGGAGTTCCTACAGGTCAGCTTTTGGGGTTTGGGTAGGGATAAGGAGTTGCGTGTGTTATGGCGTAATGCGATCTTTGCTGCTTTGTGGTTTATTTGGTTGGAGCGCAATGAAAGGGTGTTTCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_227694.p1 GENE.R_Transcript_227694~~R_Transcript_227694.p1 ORF type:5prime_partial len:96 (+),score=10.46,zf-RVT|PF13966.2|2.8e-07,zf-RVT|PF13966.2|1.5e+03 R_Transcript_227694:1-288(+)
RRPQWCLSPDRCLMCHRSGETASHLFLHCPVARSVWAMLFDVRGETLVCPSTVLEFLQVSFWGLGRDKELRVLWRNAIFAALWFIWLERNERVFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST