Transcript Information: R_Transcript_227807.p1


Annotated TAIR IDAT5G49480.1
Annotated Gene NameCa2+-binding protein 1
Annotated Gene Symbol(s)ATCP1, CP1
Annotation TypeOrtholog
Chromosome Positionchr5:20070812-20071294 | Forward length=160
E-Value1.2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.817109480889
Replicate 220.255254519252
Replicate 315.495734256221
Condition 2: 8 Hour
Replicate 112.531001473002
Replicate 214.337271298172
Replicate 316.549997918588
Condition 3: 24 Hour
Replicate 121.202210204409
Replicate 226.206837034686
Replicate 320.471441442451


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_227807.p1 GENE.R_Transcript_227807~~R_Transcript_227807.p1 ORF type:complete len:170 (+),score=28.63,EF-hand_1|PF00036.28|2.5e-06,EF-hand_1|PF00036.28|5.3e-06,EF-hand_1|PF00036.28|7.3e-05,EF-hand_1|PF00036.28|4.9e+03,EF-hand_7|PF13499.2|3.5e-11,EF-hand_7|PF13499.2|2.8e-05,EF-hand_6|PF13405.2|1.3e-05,EF-hand_6|PF13405.2|5.1e+02,EF-hand_6|PF13405.2|0.0098,EF-hand_6|PF13405.2|0.00012,EF-hand_5|PF13202.2|0.00012,EF-hand_5|PF13202.2|0.00026,EF-hand_5|PF13202.2|0.00042,EF-hand_8|PF13833.2|3.4e-07,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|1.4 R_Transcript_227807:360-869(+)
ATGTGTCCAACGGGATCAAACATACGCCCATTGACACCCAGCGACGCCACATCAGAATACCGGCGAGCATTCGAGGTGATCGACGGCGACCACGACGGAAAGATCAGCGGCGATGATCTGAGATCCTTCATGGCGTCGATCTCCGGCGACATCCAAGAGGAGGAAATGATAAAGGCGATGATTTCCCTCGCCGATGCGAATAAGGACGGGTTTGTTCAATACGACGAGTTTGAGCGCGTTTTGAAGCAGAGGAAAGGGAGAAATGGGAAGGAGAAGGTGAATGGTTACGGTGACGCTGGGGTGATGGAAGATGTGTTTAGGGTGATGGATCAGGACGGTGACGGGCGGTTGGGATTGGAGGATTTGAGAAGTTATTTGGGTCGGGCTGGGATTAAGGTTGGGGATGAGGAGATTAAGGCTATGATTAAATTGGGTGGTGGAGATGTTGGAGAGGGGGTTTCTTTTGATGGGTTCGTTAATATCTTGGCTGTTCATGATTTGGTCTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_227807.p1 GENE.R_Transcript_227807~~R_Transcript_227807.p1 ORF type:complete len:170 (+),score=28.63,EF-hand_1|PF00036.28|2.5e-06,EF-hand_1|PF00036.28|5.3e-06,EF-hand_1|PF00036.28|7.3e-05,EF-hand_1|PF00036.28|4.9e+03,EF-hand_7|PF13499.2|3.5e-11,EF-hand_7|PF13499.2|2.8e-05,EF-hand_6|PF13405.2|1.3e-05,EF-hand_6|PF13405.2|5.1e+02,EF-hand_6|PF13405.2|0.0098,EF-hand_6|PF13405.2|0.00012,EF-hand_5|PF13202.2|0.00012,EF-hand_5|PF13202.2|0.00026,EF-hand_5|PF13202.2|0.00042,EF-hand_8|PF13833.2|3.4e-07,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|1.4 R_Transcript_227807:360-869(+)
MCPTGSNIRPLTPSDATSEYRRAFEVIDGDHDGKISGDDLRSFMASISGDIQEEEMIKAMISLADANKDGFVQYDEFERVLKQRKGRNGKEKVNGYGDAGVMEDVFRVMDQDGDGRLGLEDLRSYLGRAGIKVGDEEIKAMIKLGGGDVGEGVSFDGFVNILAVHDLVC*

Click here to download the sequence:
Link to NCBI Protein BLAST