Transcript Information: R_Transcript_227866.p3


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeHomolog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value6E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.23319871378329
Replicate 20.21296077943986
Replicate 31.0372348925935
Condition 3: 24 Hour
Replicate 10.21864578312099
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_227866.p3 GENE.R_Transcript_227866~~R_Transcript_227866.p3 ORF type:complete len:105 (+),score=15.26 R_Transcript_227866:437-751(+)
ATGGCATTGGATGTTATTCGAAGAGGACTCGAGAGGAGTTCAAGAGGGTCACTTAGCTTTCAGTTACTCTATTATCAATCACCAAGAAAGCCTGGTCCTGGGAAAACTGTTGTCGACCCCCAGGGACCATTTCTTCAGAGATGGAATAAGATATTTCTACTCTTTTGTGTGCTTTCTCTAGCCTTTGATTCATTGTTCTTGTATGTTCCCTTTGTTGATCACGACAACAAGTGTGTGAAGGCTGATCACATTTTGGGAATCCTAGTTTGTGTTGTGCGCACATTACTTCATATCAAGAAACATTTAGGAGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_227866.p3 GENE.R_Transcript_227866~~R_Transcript_227866.p3 ORF type:complete len:105 (+),score=15.26 R_Transcript_227866:437-751(+)
MALDVIRRGLERSSRGSLSFQLLYYQSPRKPGPGKTVVDPQGPFLQRWNKIFLLFCVLSLAFDSLFLYVPFVDHDNKCVKADHILGILVCVVRTLLHIKKHLGV*

Click here to download the sequence:
Link to NCBI Protein BLAST