Transcript Information: R_Transcript_227867.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeOrtholog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value2.7e-317
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2365776199073
Replicate 21.020438753664
Replicate 30.4385678773932
Condition 2: 8 Hour
Replicate 11.8030828385306
Replicate 22.7662946607652
Replicate 34.2237915729325
Condition 3: 24 Hour
Replicate 11.724371382346
Replicate 21.7865084521086
Replicate 31.9018771377422


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_227867.p1 GENE.R_Transcript_227867~~R_Transcript_227867.p1 ORF type:complete len:679 (+),score=97.01,Ion_trans|PF00520.27|7.3e-38,cNMP_binding|PF00027.25|3.6e-06 R_Transcript_227867:437-2473(+)
ATGGCATTGGATGTTATTCGAAGAGGACTCGAGAGGAGTTCAAGAGGGTTCAAAAGCTTACGAGGGTCACTTAGCTTTCAGTTACTCTATTATCAATCACCAAGAAAGCCTGGTCCTGGGAAAACTGTTGTCGACCCCCAGGGACCATTTCTTCAGAGATGGAATAAGATATTTCTACTCTTTTGTGTGCTTTCTCTAGCCTTTGATTCATTGTTCTTGTATGTTCCCTTTGTTGATCACGACAACAAGTGTGTGAAGGCTGATCACATTTTGGGAATCCTAGCTTGTGTTGTGCGCACATTGTCAGACCTGTTCTATCTACTTCATATGAATATGCAGTTTCGTACTGGCTTCATTTCTCCTTCTTCTCGAGTATTGGGCAGAGGCGAATTAGTCACTGATCGTTTTGCTATTGCGAGGAGATATATCTTTTCGTACTTCTTCATTGATGTTCTTGCTGTCCTGCCCTTGCCCCAGCTGGCTGTTCTATTAATCATGCTAAGGTTGTCAAGACATTTGAGTTCAAAAGGCTTCTTGATAACTGTGATTTTCAGCCAATTTGCCCCAAGGATAGCCAGGATTTATCCTTTATACAAGGAAGTGACACGAACTTCAGGCATAATTACTGCGACGGCATGGGGTGGAGCTGCTTTCAATCTGTTTCTCTACATGCTAGCAAGTCATCTGGTTGGAGCAGTTTGGTATGTGTTTGCAGTTGATCGGCAAGAGATATGCTGGCGAAAGTCATGCATGGATCCTGAGGGACATGGGTGCCATAATCTGTCTTTATATTGCAAATATAGTAATCAACAAAAGTATACATTCAATGCGACTTACTGCAATCTTCAAGACCCTGATGATATAAAAGATTCTTCTGTCTATAACTTTGGCATGTTCTATAATGCTCTTCAATCACAAGTTGTGCAATCCAGCCATTTTTTTGAGAAGCTGTTTTATTGCTTCTGGTGGGGCCTTCAATCTATCAGCTCGCTTGGCCAGAATCTTAAAACAAGTACTTCTATTGGAGAGAACTTGTTTGCGGCCTTCATTTGTGTGTTTGGATTGTTCTTGTTTTCATTGCTCATTGGGAATATGCAGACATATCTGCAATCAACAACTGTCAGAGTTGAGGAGATGAGAGTGAAAAAGCGCGATGCAGAGAAGTGGATGTCCCATCGTATGCTTCCTGAGGAGTTAAGGAGAAGGATTAGGAGGTACGAGCAATACAAATGGCAAGAGACAAGGGGTGTCGATGAAGAGAATGTAATCTGCAATCTTCCTAAGGATCTTAGGAGGGACATCAAACGTCATCTCTGTGTATCGCTCCTTATGAGAGTGCCAATGTTTCAGAAAATGGACGAAAAGCTTATAGATGCAATGTGTGACCGTCTCAAACCAGTGCTTTACACAGATAACAGCTCCATTTTACGAGAAGGAGATCCAGTAAATGAGATGCTGTTTATTATGAGAGGAAAACTATTGACTATGACTACAAATGGTGGAAGGACTGGCTTCTTTAACTCGGATTTTCTTAACGCTGGTGATTTCTGTGGTGAAGAGTTGCTTACTTGGGCTCTAGACCCACACACCTCCTCAAATCTGCCTATCTCAACTAGAACTGTACAGACCAAAAGTGATGTTGAGGCCTTTGCACTTGTCGCAGACGATCTCAAGTTTGTGGCGTCACAATTTCGCCGTCTTCACAGCAAGCAGCTCCGACACACATTCAGGTTCTATTCACAGCAATGGAGAACATGGGCAGCCTGTTTTATACAGGTAGCATGGCGAAGACACTGCAGACGGAAGCTTGAGAAATCTCTTCAAGAGGCTGAGGTTCGGTTAAAAAACGCTCTGGCTAAGGAGGGTGGAAGTTCCCCTAGCTTTGGTGCGGCTATTTATGCATCAAGGTTCGCTGCCAACGCACTAAGGAGCTTACGACGAAATAGTACTAGAAATGCCAGAATGTCTGAGAAGCTAATTTCTCCCCTCAACCTTCAAAAGCCAACTGAGCCTGATTTCAATTCTGACGATGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_227867.p1 GENE.R_Transcript_227867~~R_Transcript_227867.p1 ORF type:complete len:679 (+),score=97.01,Ion_trans|PF00520.27|7.3e-38,cNMP_binding|PF00027.25|3.6e-06 R_Transcript_227867:437-2473(+)
MALDVIRRGLERSSRGFKSLRGSLSFQLLYYQSPRKPGPGKTVVDPQGPFLQRWNKIFLLFCVLSLAFDSLFLYVPFVDHDNKCVKADHILGILACVVRTLSDLFYLLHMNMQFRTGFISPSSRVLGRGELVTDRFAIARRYIFSYFFIDVLAVLPLPQLAVLLIMLRLSRHLSSKGFLITVIFSQFAPRIARIYPLYKEVTRTSGIITATAWGGAAFNLFLYMLASHLVGAVWYVFAVDRQEICWRKSCMDPEGHGCHNLSLYCKYSNQQKYTFNATYCNLQDPDDIKDSSVYNFGMFYNALQSQVVQSSHFFEKLFYCFWWGLQSISSLGQNLKTSTSIGENLFAAFICVFGLFLFSLLIGNMQTYLQSTTVRVEEMRVKKRDAEKWMSHRMLPEELRRRIRRYEQYKWQETRGVDEENVICNLPKDLRRDIKRHLCVSLLMRVPMFQKMDEKLIDAMCDRLKPVLYTDNSSILREGDPVNEMLFIMRGKLLTMTTNGGRTGFFNSDFLNAGDFCGEELLTWALDPHTSSNLPISTRTVQTKSDVEAFALVADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQVAWRRHCRRKLEKSLQEAEVRLKNALAKEGGSSPSFGAAIYASRFAANALRSLRRNSTRNARMSEKLISPLNLQKPTEPDFNSDDG*

Click here to download the sequence:
Link to NCBI Protein BLAST