Transcript Information: R_Transcript_22790.p1


Annotated TAIR IDAT5G06160.1
Annotated Gene Namesplicing factor-related
Annotated Gene Symbol(s)ATO
Annotation TypeOrtholog
Chromosome Positionchr5:1862623-1866298 | Reverse length=504
E-Value8.2E-281
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 161.010881301402
Replicate 240.380680131345
Replicate 352.938011688746
Condition 2: 8 Hour
Replicate 146.754505903204
Replicate 255.726134667207
Replicate 369.926578708853
Condition 3: 24 Hour
Replicate 172.443631862224
Replicate 262.562259963232
Replicate 373.289341874827


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22790.p1 GENE.R_Transcript_22790~~R_Transcript_22790.p1 ORF type:complete len:508 (+),score=116.72,DUF3449|PF11931.4|1e+03,DUF3449|PF11931.4|8.1e-76,Telomere_Sde2_2|PF13297.2|1.6e+03,Telomere_Sde2_2|PF13297.2|1.2e-26,SF3A3|PF16837.1|1.4e-25,SF3a60_bindingd|PF12108.4|1.4e-12,SF3a60_bindingd|PF12108.4|5.7e+02 R_Transcript_22790:221-1744(+)
ATGTCGTCGACGCTTCTTGAAGTAACTCGATCTTCACACGAAGAAGCAGAGAGACTTGAACGATTCATAGTCAAGGAGCTTCAGAATGAACCTACTTCTTCCAAAGACCGCCTTTTTCAGAGCCATCGTGTTCGTTTCATGATCGAACAAATCATCCTCACCACCGATAAACTCGTGGATATTTATGAAGATAAAGACGGTGCTCGTAAGGATGAGATTGCGGCTCTTGGTGGCCAGACTGCTACTGGCACCAACGTCTTTAGCGCCTTCTATGATCGATTGAAAGAGATTCGTGAATACCACAGACGACATCCTGCTGCTCGTGTTGTGGATGCTGGTGAGGAGTTTGAGCAGATGTTCAAGGAGGATCCAGTACTTGATTTTAGTGGAGAGGAAGCATATGGCCGATATTTAGATTTGCATGAATTCTACAATAGGTACATCAATTCAAAGTTCGGTGAACCAAAGGAGTACACTGCTTATCTAGAAGTTTTCTCACAGCCACATAAGATTCCTCTCAAGCATAAGATGACCAGACAGTACCGAGAGTACATCACTGATCTATTGGAGTATCTGATATCCTTCTTTGATAGGACAGAACCTTTACAAGATCTAGATAGAATTTTCTCAAAGGTAACAGATGAAATTGAAGAGCAATGGACAAATGGCAAAGTACATGGTTGGGAAATTGAGGGACAAGAGAATGGACATGTTCTTCAGCCTTCTGTGATCGATCTTGATTATTATAGTTCAGTTGAAGAGCTAATGGAAGTGGGGCCTGAAAAGTTGAAAGAGGCTTTAGCTGCACTAGGACTTAAGACAGGTGGTACGGTGCAGCAAAGAGCAGAGAGGCTTTTCCTCACCAAGAATACTCCTCTTGAGAAGTTGGATCGAAAACATTTTGCTAAACCTCCACTTAGGTTAGAGCAGAATGGCAATATGCTGACCCAGAAACAAGAAGATCTCAAAGAACTGGCTCTGATTGAAGCCAAGATGATGAAGCTATGTGAATTGCTGGATGAGACTATAGTGCGAACAAAAGAAAATGCTGTGAAGAAACAGGGGATGACTTATGATGAAATTGTGGCAGAGCATGAGGAGGAAGATTTACAAGCTGATACAGAAAGCGATGAAGAAGACCAGCCTATATACAACCCCCTTAAGTTGCCACTTGGGTGGGATGGAAAACCTATACCATACTGGCTATATAAGCTCCATGGTCTTGGACAGGAATTCAAGTGTGAAATATGCGGGAACCACAGTTATTGGGGCCGAAGAGCTTTTGAGAGGCATTTTAAGGAATGGCGTCATCAACATGGAATGCGTTGCCTTGGCATTCCTAACACAAAGAACTTCAATGAGATCACTTCAATTCAGGATGCCAAGAATTTGTGGGAGAGGATTCAAGAAAGACAAGGGTTGCACAAGTGGCGCCCAGACCTTGAAGAGGAATATGAAGATCAAGAGGGTAACATTTATAATAAGAAGACATACACTGATTTGCAACGCCAGGGATTGATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22790.p1 GENE.R_Transcript_22790~~R_Transcript_22790.p1 ORF type:complete len:508 (+),score=116.72,DUF3449|PF11931.4|1e+03,DUF3449|PF11931.4|8.1e-76,Telomere_Sde2_2|PF13297.2|1.6e+03,Telomere_Sde2_2|PF13297.2|1.2e-26,SF3A3|PF16837.1|1.4e-25,SF3a60_bindingd|PF12108.4|1.4e-12,SF3a60_bindingd|PF12108.4|5.7e+02 R_Transcript_22790:221-1744(+)
MSSTLLEVTRSSHEEAERLERFIVKELQNEPTSSKDRLFQSHRVRFMIEQIILTTDKLVDIYEDKDGARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDAGEEFEQMFKEDPVLDFSGEEAYGRYLDLHEFYNRYINSKFGEPKEYTAYLEVFSQPHKIPLKHKMTRQYREYITDLLEYLISFFDRTEPLQDLDRIFSKVTDEIEEQWTNGKVHGWEIEGQENGHVLQPSVIDLDYYSSVEELMEVGPEKLKEALAALGLKTGGTVQQRAERLFLTKNTPLEKLDRKHFAKPPLRLEQNGNMLTQKQEDLKELALIEAKMMKLCELLDETIVRTKENAVKKQGMTYDEIVAEHEEEDLQADTESDEEDQPIYNPLKLPLGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIQDAKNLWERIQERQGLHKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI*

Click here to download the sequence:
Link to NCBI Protein BLAST