Transcript Information: R_Transcript_227948.p1


Annotated TAIR IDAT1G13890.1
Annotated Gene Namesoluble N-ethylmaleimide-sensitive factor adaptor protein 30
Annotated Gene Symbol(s)SNAP30, ATSNAP30
Annotation TypeOrtholog
Chromosome Positionchr1:4751581-4752844 | Forward length=263
E-Value4.3E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7257344902643
Replicate 21.7560542166358
Replicate 31.332755641958
Condition 2: 8 Hour
Replicate 10.44519754449537
Replicate 20.40656148802156
Replicate 30.39603514080844
Condition 3: 24 Hour
Replicate 10.58438054761429
Replicate 20.72180847278253
Replicate 30.71632488066209


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_227948.p1 GENE.R_Transcript_227948~~R_Transcript_227948.p1 ORF type:complete len:275 (+),score=78.74,V-SNARE_C|PF12352.4|5.1e-06,V-SNARE_C|PF12352.4|4,DUF5089|PF17002.1|2.3e-07 R_Transcript_227948:164-988(+)
ATGTTTGGTTTTATGAAAAAGAGTACACCAGCCTCATCCAACACTAGCCCTGCTCATCCTGAGGCTGAATCAGGTCTTAACTCTGCTAAGAGAACATCATCCGAACCCATACTAGTCTCCTCTGATCTCGACAATGGTGGTAATAAAAATGGGAGGCCATACAAAGGCCCAACTTCAGCAGAAAAGAAGAGATACCAAAACAATTTCGACGACTCGGGTGGGCTGGAGAACCAGTCAGTGCAGGAGCTTGAGAATTATGCGGCCTACAAGGCTGAAGAGACGACAGGTGCAGTCAATAACTGCTTGAGGATTGCTGAGGATATAAGGGATGATGCTGCCAAGACTATTGAGACTTTGCATCAACAGGGTGAACAGATTCACAGGACTCATCAGATGGCTGTTAACATAGACCAGGATTTGAGTAAGGGGGAAAAACTGTTAAATAGCCTAGGGGGGATGTTCTCCAAGCCTTGGAAGCCAAAGAAGACACGCAACATTACAGGACCGTTATCTGCACCAGACGAGGTACCAAAAAGTGCATCAAAAGAGCAGAAAGAAAAGTTAGTGGGTGCTGCACCAAAAGGAAAGACAGGTGCTAAAACACCAACTACTGCAATGGAGAAAGTTGAGTTGGAGAAGCAAAAGCAAGATGATGGGCTTTCAGAATTAAGCAATATTTTGGGTGACTTGAAGGGCATGGCTGTTGATATGGGTGGCGAACTCGATAGGCAAAACAAAGCTCTTGACCATCTCAGTGATGATATTGATGAGTTGAACTCCAGGGTGAAAGGAGCTAACCAGCGTGCTCGCCATTTGCTCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_227948.p1 GENE.R_Transcript_227948~~R_Transcript_227948.p1 ORF type:complete len:275 (+),score=78.74,V-SNARE_C|PF12352.4|5.1e-06,V-SNARE_C|PF12352.4|4,DUF5089|PF17002.1|2.3e-07 R_Transcript_227948:164-988(+)
MFGFMKKSTPASSNTSPAHPEAESGLNSAKRTSSEPILVSSDLDNGGNKNGRPYKGPTSAEKKRYQNNFDDSGGLENQSVQELENYAAYKAEETTGAVNNCLRIAEDIRDDAAKTIETLHQQGEQIHRTHQMAVNIDQDLSKGEKLLNSLGGMFSKPWKPKKTRNITGPLSAPDEVPKSASKEQKEKLVGAAPKGKTGAKTPTTAMEKVELEKQKQDDGLSELSNILGDLKGMAVDMGGELDRQNKALDHLSDDIDELNSRVKGANQRARHLLK*

Click here to download the sequence:
Link to NCBI Protein BLAST