Transcript Information: R_Transcript_22800.p1


Annotated TAIR IDAT3G02555.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:540024-540955 | Reverse length=162
E-Value7E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6268711746431
Replicate 26.2855166851338
Replicate 37.5869449363053
Condition 2: 8 Hour
Replicate 13.2751793878481
Replicate 24.1303539706649
Replicate 33.9309220451793
Condition 3: 24 Hour
Replicate 15.7028947890475
Replicate 23.2310251877916
Replicate 35.1582488752561


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22800.p1 GENE.R_Transcript_22800~~R_Transcript_22800.p1 ORF type:internal len:157 (+),score=20.54 R_Transcript_22800:1-468(+)
TTCCCTTTAGATTCTGTCTCATATCTCTCACGTCTCCATTCTCTCTCTCTCCTCAATTTCCGTCCCTCCACCAGCGGACGGTCACCCTGTGTGTTTCCCAGGAGAGAGAAAGAGAGACAAGAATATTTTTTAAAAAAAAAAAAAGACAAAAAAAAAATGGAGCATAAAACCATAAGTGGATGTGACAGCAGGAGGGAGTATGTGGTTTGCCCTAAACCCTCCAAACTTCATTTGCATCCCATTAATCATACGGAGATCAACGATTTGAAGGCCGGAGCTGAGCTACTTGACATTATTCTTTCTAAGCAAAGTAGAGCTGAGAGATCAGGCAACCAAGTAGCTTCGTCTCCACCATTTTTTAGTGGGTCTCCGCCAATAAGGGTTTCTAATCCACAAGTCCAAGATGAGCAATTTGGTTCAGCAACCTACAACATGTTCTCTATGGTGCCGACATTGCCATCTTCACCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22800.p1 GENE.R_Transcript_22800~~R_Transcript_22800.p1 ORF type:internal len:157 (+),score=20.54 R_Transcript_22800:1-468(+)
FPLDSVSYLSRLHSLSLLNFRPSTSGRSPCVFPRREKERQEYFLKKKKDKKKMEHKTISGCDSRREYVVCPKPSKLHLHPINHTEINDLKAGAELLDIILSKQSRAERSGNQVASSPPFFSGSPPIRVSNPQVQDEQFGSATYNMFSMVPTLPSSP

Click here to download the sequence:
Link to NCBI Protein BLAST