Transcript Information: R_Transcript_22829.p1


Annotated TAIR IDAT5G42970.1
Annotated Gene NameProteasome component (PCI) domain protein
Annotated Gene Symbol(s)COP8, FUS4, EMB134, COP14, CSN4, FUS8, ATS4
Annotation TypeOrtholog
Chromosome Positionchr5:17237470-17240649 | Reverse length=397
E-Value3.5E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3856298545043
Replicate 20.84662501678621
Replicate 32.9557080769229
Condition 2: 8 Hour
Replicate 11.7771998752033
Replicate 21.9836266149439
Replicate 33.3668310021686
Condition 3: 24 Hour
Replicate 12.9622977068005
Replicate 23.9130298031669
Replicate 32.8242199595997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22829.p1 GENE.R_Transcript_22829~~R_Transcript_22829.p1 ORF type:5prime_partial len:124 (+),score=29.31 R_Transcript_22829:2-373(+)
GATGCAGTAAATGCAGAGGCCTATATTAACAAAGCGTCCTTCATGGTCAGCAACAGCCAGAATGAAGTATTGAGTTTGCAGTATAAGGTTTGTTATGCAAGGATCCTAGACTTGAAGAGGAAGTTCTTAGAAGCAGCACTACGCTATTATGACATATCTCAGATTGAGAAGCGGCAAATTGGTGATGAGGAAATTGATGAAGCTGCCCTAGAACAAGCTTTAGCAGCTGCTGTCACTTGCACAATATTGGCTGGTGCTGGACCTCAACGGTCTCGGGTTCTCGCTACTTTGTACAAGGATGAACGTTGCTCAAAGTTGAAGATTTACCCAATTTTGCAGAAGGTTGTCTCTCTTTTTTTCTTTTTAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22829.p1 GENE.R_Transcript_22829~~R_Transcript_22829.p1 ORF type:5prime_partial len:124 (+),score=29.31 R_Transcript_22829:2-373(+)
DAVNAEAYINKASFMVSNSQNEVLSLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEAALEQALAAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVVSLFFFLT*

Click here to download the sequence:
Link to NCBI Protein BLAST