Transcript Information: R_Transcript_22830.p1


Annotated TAIR IDAT5G42970.1
Annotated Gene NameProteasome component (PCI) domain protein
Annotated Gene Symbol(s)COP8, FUS4, EMB134, COP14, CSN4, FUS8, ATS4
Annotation TypeOrtholog
Chromosome Positionchr5:17237470-17240649 | Reverse length=397
E-Value4E-232
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.835576519477
Replicate 219.722367582051
Replicate 325.171673448356
Condition 2: 8 Hour
Replicate 119.973862867079
Replicate 223.315616122045
Replicate 332.836059661599
Condition 3: 24 Hour
Replicate 136.629310408247
Replicate 229.93567723575
Replicate 333.200450929563


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22830.p1 GENE.R_Transcript_22830~~R_Transcript_22830.p1 ORF type:complete len:445 (+),score=94.01,PCI|PF01399.23|3.2e+03,PCI|PF01399.23|1.4e-17 R_Transcript_22830:142-1335(+)
ATGGAAAGTGCATTAGCGAGTGCTTCAGCAATCGCAGATCAACGCCAGAAGATCGAACAATATCGCCATATTCTCACTACCGTCATATCCTCCAATGACGTTACTCAAGCGAGGAAATTCATTGATCACATAATATCGGAGGATTGCCCGCTAGTAGTTACAAGACAATTGTTGCTGAACTCTGCGCAAGAGATAGGGAAGTTGGATGCTGAAGTACAGAAAGAGATTGCTCATTATACTCTTAACCAGATTACCCCTCGTGTTGTTTCTTATGAAGAGCAGGTTCATATGATCAGGGAAAAGCTCGCTGAGCTGTATGAGTCTGAGCAGGAATGGTCAAAAGCAGCTAATATGCTTAGTGGAATTAATTTGGATTCTCCAATGAGAGCACTTGATGATGCCTTCAGGCTGTCAAAATATGTTCACATTGCTCGTTTGTATCTTGAGGATGATGATGCAGTAAATGCGGAGGCCTATATTAACAAAGCATCCTTCATGGTCAGCAACAGCCAGAATGAAGTATTGAGTTTGCAGTATAAGGTTTGTTATGCAAGGATCCTAGACTTGAAGAGGAAGTTCTTAGAAGCAGCACTACGCTATTATGACATATCTCAGATTGAGAAGCGGCAAATTGGTGATGAGGAAATTGATGAAGCTGCCCTAGAACAAGCTTTAGCAGCTGCTGTCACTTGCACAATATTGGCTGGTGCTGGACCTCAACGGTCTCGGGTTCTCGCTACTTTGTACAAGGATGAACGTTGCTCAAAGTTGAAGATTTACCCAATTTTGCAGAAGGTTTATTTGGAAAGGATCTTGAGAAAACCTGAAATTGATGCATTTGCTGAAGAATTAAAACCACATCAGAAAGCATTTTTGCCAGACAACTTCACTGTGTTGGATCGAGCTATGATTGAGCACAATCTTCTCAGTGCTAGTAAACTTTACACAAACATAAGTTTTGATGAATTGGGAACATTGCTGGGCATCCCTCCACATAAGGCTGAGATGATTGCGTCGAGGATGATATATGAAGATCGAATGAGGGGCTCAATTGATCAGGTGGAAGCTGTCATACATTTTGAGGATGACACAGAAGAGTTGCAGCAGTGGGATCAACAGATCGTTGGAGTATGTCAGGCCCTCAATGATATCCTTGATGGCATGGCCAGAAAGGGTTTCCAGATTCCTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22830.p1 GENE.R_Transcript_22830~~R_Transcript_22830.p1 ORF type:complete len:445 (+),score=94.01,PCI|PF01399.23|3.2e+03,PCI|PF01399.23|1.4e-17 R_Transcript_22830:142-1335(+)
MESALASASAIADQRQKIEQYRHILTTVISSNDVTQARKFIDHIISEDCPLVVTRQLLLNSAQEIGKLDAEVQKEIAHYTLNQITPRVVSYEEQVHMIREKLAELYESEQEWSKAANMLSGINLDSPMRALDDAFRLSKYVHIARLYLEDDDAVNAEAYINKASFMVSNSQNEVLSLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEAALEQALAAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKAFLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEMIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGVCQALNDILDGMARKGFQIPV*

Click here to download the sequence:
Link to NCBI Protein BLAST