Transcript Information: R_Transcript_22839.p1


Annotated TAIR IDAT4G27430.1
Annotated Gene NameCOP1-interacting protein 7
Annotated Gene Symbol(s)CIP7
Annotation TypeOrtholog
Chromosome Positionchr4:13718817-13722736 | Forward length=1058
E-Value2E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.114484182676
Replicate 221.551189856115
Replicate 327.730236476161
Condition 2: 8 Hour
Replicate 119.935209739658
Replicate 222.246503928954
Replicate 325.780548417361
Condition 3: 24 Hour
Replicate 124.112547744699
Replicate 221.528790647665
Replicate 320.898746163107


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22839.p1 GENE.R_Transcript_22839~~R_Transcript_22839.p1 ORF type:complete len:1173 (+),score=336.34 R_Transcript_22839:335-3853(+)
ATGGATTCCTCTACTCGTCTCGATTATGTCCTCTTCCAGCTCACTCCTACTAGAACCAGGTGTGATCTGGTGATATTCGCCGGGAAATCGAACGAGAAGTTGGCGTACGGGCTGCTAGAGCCGTTCATTGCGCACTTACGATCAGCTAAAGATCAGATTTCCAAAGGCGGTTATTCCGTCACTCTTAGACCTCCTTCCTCCTCCATCGCTCACTGGTTCACTAAAGCCACTCTTCAGAGGTTTGTGAGATTTGTGAGTACGCCGGAGGTGTTAGAGAGGTTTGTGACGATAGAGAGGGAGATTTCGCAGTTGGAGAATTCCATCAAGTCTTATGAGGCTTCTAATGGCGATCCTGATCTTGGAGCTCAAGGTAATTCTAAACAATCAGGTGCTTCCTTTAAGTCGAAAAGCGGATTCACTGATGGCAGTGATCCTGCCCAGGAGGAAAACTCCAAGGCTCGTCTCCAGCGTGTTGTGGAAACTCGTAAAGCAGTCCTTAGAAAGGAGCAAGCAATGGTATATGCTCGTGCTTTGGCAGCTGGATTTGAAATGGATAATCTGGATGACCTTTTGATGTTTTCTGATGCTTTTGGAGCTTCACGCTTGAGAGAAGCATGCATAAACTTCAAGGAGTTATGCAAGAAGAAAAATGAAGATAGGCTTTGGGTGGATGAGATTGCTGCAATGCAGGCTATCGTGCAACCCGACTTGTCGTACTTGGGGACATCTGGAATTATCCTTGCTGGTGAAGATGATCCTGCCCAAAATTTCATGGTGGGTGGGAAGCAGAATGGAAGCACAGACTTGTCACTTTCTGATTCTATGACTAGTCATGGGAGTTCAGATGCAAATCAAGAAAATGGTTCAGCTCAGACACTACCAACAGATGCAAAAGCACAAATGCCAAATCCATGGGCAAACCAATTCCCTCCATATTACCATGCATACCAACAAATGCCCCCCTACCAAGGGTATGTGTTCCCTGGAATGCAGGCTGGCGCACCTTATTATCCTCCAAATATGCAGTGGACTCCGAATGCTGATCGTGAATCACATGATCGCCGTAGTCGCAAATCATCATCCAAGAAGAAAGACAAAGCCTCTAAATTACGGGGATCAGAGAATGAGGAGCTAGATGAATCTACTGAGCCCAGTGGTTCCAGTTCCGAGACTGAGACTGATTCCTCTCCAGAGAGGTCTCGAAAGAAAAGGAATGGGAAGAAATCTTCAAGAAAAGTTGTTATACGCAATATAAATTACATTACATCGAAAAACGATGGAGAAAAAAATGGTGATTCTGAGGAGGATTCATCTGATGATGATTATGTGGATGGTGATTCCCTCAAGCAGCAGCTAGAAGACGCAGTTGGCTCCTTTGAAAAACATCAGAAGTCTTCACGCAGCCATAGAAAACGTAATGACTCTAAGCACCGCAGTTCTGTTAATGGCTCCACTGATCAGGATGGTGAAAATGCATCTCTGAAGAATAATGGAAACAAAGGAAATGAAAACTGGGATGCCTTCCAGCAGCTGTTGCTTAAGGATGAACCTGACAATAATGGTCCTGAGCCACACCCAGTGCAGTTTGAAGAGGAACATTTTGCAACAGCCAAGTCTGTGGAACCAAATCCGTATGCATTAAATCTGGAAGGAGAGGGAAGAGCAAAGCAAAGGCCTGTTGCTACTGATGCTTTTCTTGTCACTGAGAAGGGCATAGGTGATGATATCGGCACAGCTAAAATCTCAGTTGGAAACTTTGATCCCCTTGAGAGTTTACGCCCAGCCATGAAAAAGGGTAGTGCTCCAGAAGAATTCCTGTTTTCACAAAGAATTGAAGAACCAGAGAGTTATGCACGGGTGACATTGTCTGATGACACTGCCCGTTCATCTGTAATCAGAAGTCAAAGCGGTGAGGATTGGTTCATCAGCAAGCAATCAAATGAACCTTCAGGGGAAAATAGTCATCTCAGCTTTATTGAAGGAGATTATGTGACAACTCCTGCTAACCAAGCCGAGAAGAAAAAGAAAGATGTTGTTTTTGATGATTCTCTCATGATTCATGGAATGATAATGGATGACCATCGTGAATCCCAGCTGCAAACTGATATAAGCCTTGTTTCTGATGTTGTCGAGGCTTCCTTTATTGAAAATGGTATGGCAGAAGTGCCACAGAAAAAAGCTGAATCGCATGGGTTCTATGAACCAGTTGATCTTTACATGGTTCGAGACCGTGATACAGTTGTGGAAGAACCAGTGGCTTCTTGGACCCCAGAGATGGATTATGAAAATAATGTTTGTGTTAAAAAAGACTCAGAGGCAGATGCATGTACTGACTCGAACATGAAATCTAATGAAAAGGATTCAAACAACAAAAAGACTGGGGCTTCTGTCACAAAAACCTCAACTAAAGTCGCAACGTCAAGAGTCTTGGGTGGATCTTTAAGGAAAAGTAAACCTGAAACAACAACGGGGAGCAAAAGGTCGACTTTCGGGAGCAGAACATCTGTTTCCAGGAACCAAGCTGAGATGGAAGAAGAGAGAAGAAAGAGAATAGAACAATTAGCTCTTCAGAGACAAAAAAGAATTGCTGAAAGGAGTGCTTCCAGAGGTGGCAGTCCAGCGACAGCTACAAAGACGCAAACAGGAAACAAAGTAAAGTCAGCTTCCCCTAATGCTCAGAGATCAAAACTTCAATCACCAGCTGAAGAAACGAAGCCGCCAAAGCCCATCCTCAGGACATCCACCATTGAGAGACTTGCAGCTGCAAAAACAAGCCCAAAGGTATCATCTGATCCACCTAAGAAAGAAGTTTCTAAAGTGAACAATGGATCACGAAAGACTGCTGGTGCAGATTTGAAGAAGGTGAAAACGAACAAGATTGGAAGTTCTGAAAAGAAAGCTGAAGATGAAAACGTAGTTGGTGTTAGCCCGTCTATTTCTGAACCTGAGGAGGAAAAGATTACTGACAAAATTGATGCTGTGGTACTATCTTCCGATTTGCCCGTTGTTCAAAGAGTAGACGCTTCTGATGAGGTAGACGATTCCACAGACATTAAAGAGATTGATGTTAAATCTTCTGTCGTCAATAAGGAAGCAAAAGTAGATGTGCAGACAGGTAGCTTTGACGAAAATGTAGGAAACCCTGTTGAAGATCATTCAACAAAGCCAGATTCTGTCGTAGACAGCAGTAATGAGATATCTGAAGCATCCATCCCCTTAGCTGAAGAGGAGAAAATTTCTGAAGATAATGTAAAAGCTCCTCCGGAATTGAGTATCCATCCCGTGCCTGAGTCACCCACCAAACCTGTAGCCTCTCCTTTTATTGTTGATGAGAAGACTGCAACCAATGGGAATGTTCAAAACTTTCCTGAAATTTCTGAAGTGCATGAATCAACTCCCCCACAAAATGAAATGAGCCTAGATCCAATCCAGTCGAGAAAGAAATGGGGCAGTGCTGAAAACTCTCCGAAAGCAGCAAAGGGATTCAGGAAGCTTCTAATGTTTGGTCGAAAGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22839.p1 GENE.R_Transcript_22839~~R_Transcript_22839.p1 ORF type:complete len:1173 (+),score=336.34 R_Transcript_22839:335-3853(+)
MDSSTRLDYVLFQLTPTRTRCDLVIFAGKSNEKLAYGLLEPFIAHLRSAKDQISKGGYSVTLRPPSSSIAHWFTKATLQRFVRFVSTPEVLERFVTIEREISQLENSIKSYEASNGDPDLGAQGNSKQSGASFKSKSGFTDGSDPAQEENSKARLQRVVETRKAVLRKEQAMVYARALAAGFEMDNLDDLLMFSDAFGASRLREACINFKELCKKKNEDRLWVDEIAAMQAIVQPDLSYLGTSGIILAGEDDPAQNFMVGGKQNGSTDLSLSDSMTSHGSSDANQENGSAQTLPTDAKAQMPNPWANQFPPYYHAYQQMPPYQGYVFPGMQAGAPYYPPNMQWTPNADRESHDRRSRKSSSKKKDKASKLRGSENEELDESTEPSGSSSETETDSSPERSRKKRNGKKSSRKVVIRNINYITSKNDGEKNGDSEEDSSDDDYVDGDSLKQQLEDAVGSFEKHQKSSRSHRKRNDSKHRSSVNGSTDQDGENASLKNNGNKGNENWDAFQQLLLKDEPDNNGPEPHPVQFEEEHFATAKSVEPNPYALNLEGEGRAKQRPVATDAFLVTEKGIGDDIGTAKISVGNFDPLESLRPAMKKGSAPEEFLFSQRIEEPESYARVTLSDDTARSSVIRSQSGEDWFISKQSNEPSGENSHLSFIEGDYVTTPANQAEKKKKDVVFDDSLMIHGMIMDDHRESQLQTDISLVSDVVEASFIENGMAEVPQKKAESHGFYEPVDLYMVRDRDTVVEEPVASWTPEMDYENNVCVKKDSEADACTDSNMKSNEKDSNNKKTGASVTKTSTKVATSRVLGGSLRKSKPETTTGSKRSTFGSRTSVSRNQAEMEEERRKRIEQLALQRQKRIAERSASRGGSPATATKTQTGNKVKSASPNAQRSKLQSPAEETKPPKPILRTSTIERLAAAKTSPKVSSDPPKKEVSKVNNGSRKTAGADLKKVKTNKIGSSEKKAEDENVVGVSPSISEPEEEKITDKIDAVVLSSDLPVVQRVDASDEVDDSTDIKEIDVKSSVVNKEAKVDVQTGSFDENVGNPVEDHSTKPDSVVDSSNEISEASIPLAEEEKISEDNVKAPPELSIHPVPESPTKPVASPFIVDEKTATNGNVQNFPEISEVHESTPPQNEMSLDPIQSRKKWGSAENSPKAAKGFRKLLMFGRKS*

Click here to download the sequence:
Link to NCBI Protein BLAST