Transcript Information: R_Transcript_228518.p1


Annotated TAIR IDAT1G73030.1
Annotated Gene NameSNF7 family protein
Annotated Gene Symbol(s)VPS46.2, CHMP1A
Annotation TypeOrtholog
Chromosome Positionchr1:27473938-27474848 | Forward length=203
E-Value1.2E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.71694684348335
Replicate 30
Condition 2: 8 Hour
Replicate 10.95554594916079
Replicate 20.32723241718808
Replicate 30.61981109435468
Condition 3: 24 Hour
Replicate 10.55994651774888
Replicate 21.0758662873452
Replicate 30.53384645577798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_228518.p1 GENE.R_Transcript_228518~~R_Transcript_228518.p1 ORF type:complete len:205 (+),score=56.82,Snf7|PF03357.17|8.2e-12,Snf7|PF03357.17|79 R_Transcript_228518:90-704(+)
ATGGGAGGAAGCGCAGAGAAGCTAATGAATCAGGTAATAGAGCTGAAGATGACATCAAAGTCCCTACAAAGACAAGCCAAGAAATGCGAAAAAGAAGAAAAATCAGAGAAGTTGAAGATCAAGAAAGCCATGGAGAAAGGCAACATAGATGGTGCTCGAATCTACGCGGAGAACGCCATCCGAAAGAAGACCGAGCACTTCAATTATCTCAGGCTGTCATCAAGGTTGGATGCAGTTGTTGCCAGGCTTGACACTCAGGCTAAGATGCAGACTGTGTCCAAATCTATGGGCTCCATTGTCACCTCCCTTAGTTCTTCTCTTGCTACTGGTAACTTGCAGAAGATGTCAGAAACAATGGACAAGTTTGAGCAGCAGTTTGTGAACATGGAGGTTCAAGCAGAGTTTATGGAAAATTCAATGGCTGGATCAACCTCGCTTTCATTCCCTGAATCAGACGTTAAAAGTTTGATGCAACAAGTAGCTGACGACTATGGTTTGGAAGTTTCGGTTGGTCTTCCACAGCCTGCTGCCAACCCTGTCCCATTGAAGACGAGTGAGACAGTCGATGAGGATGATTTATCCAAGCGACTTGCAGAGCTGCAATCAAGAGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_228518.p1 GENE.R_Transcript_228518~~R_Transcript_228518.p1 ORF type:complete len:205 (+),score=56.82,Snf7|PF03357.17|8.2e-12,Snf7|PF03357.17|79 R_Transcript_228518:90-704(+)
MGGSAEKLMNQVIELKMTSKSLQRQAKKCEKEEKSEKLKIKKAMEKGNIDGARIYAENAIRKKTEHFNYLRLSSRLDAVVARLDTQAKMQTVSKSMGSIVTSLSSSLATGNLQKMSETMDKFEQQFVNMEVQAEFMENSMAGSTSLSFPESDVKSLMQQVADDYGLEVSVGLPQPAANPVPLKTSETVDEDDLSKRLAELQSRG*

Click here to download the sequence:
Link to NCBI Protein BLAST