Transcript Information: R_Transcript_22878.p1


Annotated TAIR IDAT5G20350.1
Annotated Gene NameAnkyrin repeat family protein with DHHC zinc finger domain
Annotated Gene Symbol(s)TIP1
Annotation TypeOrtholog
Chromosome Positionchr5:6876772-6881102 | Forward length=620
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.685697512865
Replicate 27.3016500674916
Replicate 311.258643826239
Condition 2: 8 Hour
Replicate 111.732021844893
Replicate 214.757490797815
Replicate 317.478289670017
Condition 3: 24 Hour
Replicate 113.767587641962
Replicate 28.8970982541587
Replicate 312.956709265969


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22878.p1 GENE.R_Transcript_22878~~R_Transcript_22878.p1 ORF type:complete len:647 (+),score=139.92,zf-DHHC|PF01529.16|9.6e+02,zf-DHHC|PF01529.16|1.4e-32,Ank_2|PF12796.3|3.2e-10,Ank_2|PF12796.3|2.9e-14,Ank_2|PF12796.3|2.2e+02,Ank_5|PF13857.2|7.9,Ank_5|PF13857.2|7.1e-05,Ank_5|PF13857.2|2.8e-07,Ank_5|PF13857.2|0.067,Ank_5|PF13857.2|1.1e-05,Ank_5|PF13857.2|1.5e-06,Ank_4|PF13637.2|0.018,Ank_4|PF13637.2|1.1e-06,Ank_4|PF13637.2|6.3e-06,Ank_4|PF13637.2|1.6e-06,Ank_4|PF13637.2|1.2e+04,Ank_3|PF13606.2|8.9e+02,Ank_3|PF13606.2|0.0085,Ank_3|PF13606.2|0.042,Ank_3|PF13606.2|4.8e+02,Ank_3|PF13606.2|0.29,Ank_3|PF13606.2|0.01,Ank_3|PF13606.2|88,Ank|PF00023.26|2.3,Ank|PF00023.26|0.023,Ank|PF00023.26|1.8e+03,Ank|PF00023.26|0.009,Ank|PF00023.26|0.039 R_Transcript_22878:340-2280(+)
ATGTCGTCGGAGATCGAGGTGGTGGAGGAGTATACGGCGGAAACCCGAGATCGGGGGGCGTCATCATCGACGTCATCAACATCGGGAATGATGAATGGTAATAATAATGGAGAGGAAGAGAGGTTGAGGGAGGACGTGTACACAGCAGCAGCATATGGAGATATGGAGAAACTGGAAAGGCTGGTGGAGAGAGAGGGGTGTTCAGTATCAGAACCTGATGGCCTCGGTTACTACGCTTTGCAGTGGGCTGCCCTCAACAATCGTACTGCTGCTGCCCGCTACATTCTTGAGCACGGTGGAGATGTGAATGCAGCGGATCACACTGGTCAGACAGCATTGCATTGGAGTGCAGTACGAGGAGCAGTCCAGGTTGCAGAGCTCCTTCTGCAAGAGGGTGCTCGGGTTAACACCGCCGATATGTATGGTTATCAGACAACACATGTTGCCGCCCAGTATGGCCAGACAGCTTTCCTTTATCACATTGTCATGAAGCGGAATGCTGATCCAGATGTTCCAGATAATGATGGAAGAAGTCCTTTGCACTGGGCAGCGTACAAAGGCTTTGCTGATTGTATTCGTCTTCTTCTATTTTTGGATGCTTATCGAGGGCGTCAAGATAAAGAAGGTTGTACCCCTCTTCATTGGGCTGCAATTAGGGGAAACTTGGAGGCATGCACGGTTTTGGTACAGGCTGGAAAGAAAGAAGACCTAACTGTGGCAGATAATACTGGCCTAACTCCAGCACAGTTGGCTGCAGAAAAGAATCACAGACAAGTTGCTTTTTTCCTTGGAAATGCCCGTAGGCTACTTGAAAGACGCTGTGATGGGAACAGCCGGCTTGGGAAGCTTTCAAAATTAGGGCTTGCACCTGTCCTGTGGTTTATGATTTTCTTGTTGCTTGCAATGTACACGCACTCAGTCATCTTGGACTCAGAGTTTCCAAGGTTAACCTTGGGATTTGGCCTTGTTGCATGGCTTGGTGTTTTTCTAGCTTCTGGTGGACTAGTTATGTTCTATAGGTGCAGCAGAAAGGATCCAGGTTTTATCAGAATGAATGTGCATGATGCTCAAAACATGAAAGATGATGAACCATTGCTGAAGATTGAGATAGACAATCCAGCTCTGCTGGCTGGAAACTGGTCTCAACTCTGCATAACATGCAAGATAGTCAGACCTCTTCGCGCAAAGCATTGTTCAACCTGTGATCGTTGTGTTGAGCAATTCGATCATCACTGTCCTTGGGTATCAAATTGCATTGGCAAGAAAAACAAAAGGGATTTCTTCTTGTTTCTTGTGCTGGAAGTTGCTGCGATGCTGATGACTGGTCTAGTCACCCTTCTAAGGATATTGACTGATCCAATGGCTCCATCTTCTTTTGGAGCATGGCTTAATTATGCTGGTACTCATCATACTGGTGCTATAGCATTCCTGGTTGCTGATTTCTTCCTCTTTTTTGGGGTGGCGGTATTAACAATTGTGCAGGCTTCTCAGATTTCTCGCAATATAACTACAAATGAAATGGCAAATGCAATGCGTTACAGCTACTTGAGAGGTTCTGGTGGTCGGTTCAGAAACCCATTTGATCATGGGGTTCGGAAGAATTGTTCCGATTTTTTGATCAATGGGTACAATGAAGATGTGGAGTGTGCTGAAGATTCAACTAATGATGATGAAATTGGAATGACACATATGCCAAGCAACACGAACCTGCATAATGGGTTAGTCCATTCTCATCAAACCAATGGCAGTGGTCATGTTGCTATTAATGTGAATTCAAAGAACTCAAAAACTGCTCATGGCCATGCTCATTCACATTGTAATCATCAGCATAGTCACGGAAGAAATGGTGTTCCTCTGGGCTTGGGAGAAGTAATTCACAATCAGTTACAGCATCATGATACATGCCCAATGGAAATGAAATTGTTTACCATGTTTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22878.p1 GENE.R_Transcript_22878~~R_Transcript_22878.p1 ORF type:complete len:647 (+),score=139.92,zf-DHHC|PF01529.16|9.6e+02,zf-DHHC|PF01529.16|1.4e-32,Ank_2|PF12796.3|3.2e-10,Ank_2|PF12796.3|2.9e-14,Ank_2|PF12796.3|2.2e+02,Ank_5|PF13857.2|7.9,Ank_5|PF13857.2|7.1e-05,Ank_5|PF13857.2|2.8e-07,Ank_5|PF13857.2|0.067,Ank_5|PF13857.2|1.1e-05,Ank_5|PF13857.2|1.5e-06,Ank_4|PF13637.2|0.018,Ank_4|PF13637.2|1.1e-06,Ank_4|PF13637.2|6.3e-06,Ank_4|PF13637.2|1.6e-06,Ank_4|PF13637.2|1.2e+04,Ank_3|PF13606.2|8.9e+02,Ank_3|PF13606.2|0.0085,Ank_3|PF13606.2|0.042,Ank_3|PF13606.2|4.8e+02,Ank_3|PF13606.2|0.29,Ank_3|PF13606.2|0.01,Ank_3|PF13606.2|88,Ank|PF00023.26|2.3,Ank|PF00023.26|0.023,Ank|PF00023.26|1.8e+03,Ank|PF00023.26|0.009,Ank|PF00023.26|0.039 R_Transcript_22878:340-2280(+)
MSSEIEVVEEYTAETRDRGASSSTSSTSGMMNGNNNGEEERLREDVYTAAAYGDMEKLERLVEREGCSVSEPDGLGYYALQWAALNNRTAAARYILEHGGDVNAADHTGQTALHWSAVRGAVQVAELLLQEGARVNTADMYGYQTTHVAAQYGQTAFLYHIVMKRNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLTVADNTGLTPAQLAAEKNHRQVAFFLGNARRLLERRCDGNSRLGKLSKLGLAPVLWFMIFLLLAMYTHSVILDSEFPRLTLGFGLVAWLGVFLASGGLVMFYRCSRKDPGFIRMNVHDAQNMKDDEPLLKIEIDNPALLAGNWSQLCITCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKRDFFLFLVLEVAAMLMTGLVTLLRILTDPMAPSSFGAWLNYAGTHHTGAIAFLVADFFLFFGVAVLTIVQASQISRNITTNEMANAMRYSYLRGSGGRFRNPFDHGVRKNCSDFLINGYNEDVECAEDSTNDDEIGMTHMPSNTNLHNGLVHSHQTNGSGHVAINVNSKNSKTAHGHAHSHCNHQHSHGRNGVPLGLGEVIHNQLQHHDTCPMEMKLFTMFI*

Click here to download the sequence:
Link to NCBI Protein BLAST