Transcript Information: R_Transcript_228796.p1


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value6E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38761113996507
Replicate 20.12160019546119
Replicate 30.26532900690524
Condition 2: 8 Hour
Replicate 10.094540019101333
Replicate 20.30217407893494
Replicate 30.17520859672188
Condition 3: 24 Hour
Replicate 10.44320091173174
Replicate 20.17031087946392
Replicate 30.16901702460925


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_228796.p1 GENE.R_Transcript_228796~~R_Transcript_228796.p1 ORF type:5prime_partial len:518 (+),score=86.10,RVT_1|PF00078.23|3.6e-09 R_Transcript_228796:3-1556(+)
GGTAGAATATGGGTGCGTTGGTGTCCTTCTACCTTTCATGTCGATGTGGAGATGTCTTTACCACAAGTTGTTCACTGCAAGGTCAAGCATCTGCCCACTGGGAGGTCCTTTTATGCCTCCTATGTTTATGGGTTTAACAATCTGGATCAGAGGAAAAGTCTCTGGGATTTTCTTATTAGTGTTGCAACAGGTATTTCTCTTCCTTGGGCCATTTTAAGTGACTTCAATAATGTGCTTAATGGAGAGGATAGAATTGGAGGTCAGAGAGTACAAATGGTTGAAATCATGGACTTTCAAAATTGTATACAACAATTACAATTGGTTGAGATGCATAGAGTGGGGGCCAGGTTTACTTGGAGTAAACAAGAAGCTGGCTCTAGGGTCATGTCTAAGATTGATTGGGTCTTTGTGAATGATAAATGGGTGGATGATTTCAACAACTCAACTACTTATGCTTTAGCTGAGGAGACTTCTGATCACTGTCCACTCATAGTTGACTTTTACCAGGTTCCTAAGCTGGGTGTTGCACCTTTAAAATATTTTGATATGTGGGCTCATGCTGATAAATTCTTGGAGATTATCCAGGAGCATTGGAGTATGGATGTCAGGGGATGTAAAATGTATAGAGTGTTGAGGAAACTAAAAGCCCTCCAGGCCCCTCTTAGAGCACTAAATAAAATTCAGTTTGGTAATATACAAACTAAAGCTGAGGAGGCAAAGCATAAGCTGATTCAGGCTCAACAAGCTGTACAGATGAACCCCTTAAATATTGCTCTGCAGGAGGAGGAGACATCATGCTTGCGCGATCATAAGAGGTACACTAAAGCACTAGAAAGTTTCCTTCTGCAAAAATCTAAAGTGGACTGGGTGACTTTCTCTGATGCTAATACTAAGTATTATCACTCTATTCTCAAGAAGCGAAGACACCACAACAGAATTGTAGCTATACAAGATGAACAAGGTAATCTCATCACAGAATGCAAAGGGGTGGTGGATACATTTTATGAGTTTTATAAAGGGATGTTGGGGACCTCATGGGTTGCATCTGATATGATAAGGAAGGAAATCATTGCTCATGGGGAGACACTAAACATTGAACAGCAATTGAATCTCATAGCTCCTTTCACTAAGGAGGAAGTACAGAATGCTCTATTTTCCATTCCCTCTATTAAATGCCCAGGTCCAGATGTGTATGGAAGTGGTTTCTCTAAATCATCCTGGGAGGTTATAGGAGAGGAGGTATGTGATGCTATACTGGACTTTTTCAAATCAGGGAGGATACTTAAAGAGCTAAATGCAACAACACTTACTCTTGTTCCAAAAGTTGATGTACCAAGCAGGGCAGGTGACTTCAGACCAATTTCTTGCTGTAATACCTTGTATAAAGTAATTTCCAAACTACTATGTGCCAGATTGAGCAAGGTGCTACCCTCTCTTGTTAGCCCTAATCAGGGGGCATTCATTAAAGGGAGAGTGATTGGACATAACATAATGATAGCCCAGGAACTGATCAGACTTTATAACAGGGCCAGAATTCCCCTAGATGCTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_228796.p1 GENE.R_Transcript_228796~~R_Transcript_228796.p1 ORF type:5prime_partial len:518 (+),score=86.10,RVT_1|PF00078.23|3.6e-09 R_Transcript_228796:3-1556(+)
GRIWVRWCPSTFHVDVEMSLPQVVHCKVKHLPTGRSFYASYVYGFNNLDQRKSLWDFLISVATGISLPWAILSDFNNVLNGEDRIGGQRVQMVEIMDFQNCIQQLQLVEMHRVGARFTWSKQEAGSRVMSKIDWVFVNDKWVDDFNNSTTYALAEETSDHCPLIVDFYQVPKLGVAPLKYFDMWAHADKFLEIIQEHWSMDVRGCKMYRVLRKLKALQAPLRALNKIQFGNIQTKAEEAKHKLIQAQQAVQMNPLNIALQEEETSCLRDHKRYTKALESFLLQKSKVDWVTFSDANTKYYHSILKKRRHHNRIVAIQDEQGNLITECKGVVDTFYEFYKGMLGTSWVASDMIRKEIIAHGETLNIEQQLNLIAPFTKEEVQNALFSIPSIKCPGPDVYGSGFSKSSWEVIGEEVCDAILDFFKSGRILKELNATTLTLVPKVDVPSRAGDFRPISCCNTLYKVISKLLCARLSKVLPSLVSPNQGAFIKGRVIGHNIMIAQELIRLYNRARIPLDAC*

Click here to download the sequence:
Link to NCBI Protein BLAST