Transcript Information: R_Transcript_228796.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.79856704176894
Replicate 20.91858814321304
Replicate 30.50108488491584
Condition 2: 8 Hour
Replicate 10.68866495164127
Replicate 20.69877755753705
Replicate 30.51051404869838
Condition 3: 24 Hour
Replicate 10.64568832827918
Replicate 20.8959948924297
Replicate 30.61559169431899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_228796.p2 GENE.R_Transcript_228796~~R_Transcript_228796.p2 ORF type:complete len:320 (+),score=29.79,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.3e-17 R_Transcript_228796:2020-2979(+)
ATGAAGGAGGAACTGATCAACCTCACAGGATTTGCAAAAGGATCTTTCCCTATGAAATACCTTGGTATGCCTATATCACCTACTAAATGGTCCAAGATGGACTGCAATTTTCTGGTTGAGAAATTAACAGCTCGAATTCATTGTTGGGCCACCAGACATCTTACTTTGGCGGGTAGAGTACAATTGATAAATTCTGTATTGATTTCTCTACATACTTACTGGGCAACAATATTTATCATTCCTTCAGCTGTCATCAAAATGATAGAACAGACTTACACAACCTTTCTATGGGGGCAGACCATTGAGAGAACCAAGATACCATTGGTTTGTTGGGAGAAGATTTGTTTACCAAAGAAGTATGGGGGACTAAACATTCGGAGATGTGCTATCTGGAATAAGGCAGCAATTGGGAAGCATCTATGGTGCATAGCTATGAAGCAGGATGTATTGTGGGTCAAATGGGTGAATGAAATTTATCTGAAGGGGAAGGACCTTCATGAATATTCTCTTCCTCATGATTGCAGCTGGTATTGGTGTAAGCTGATGAAACTCAGAAATTCTAATATAGTTTCAAATGGTACTTGGCCTGTCTCCCCTACAGGTATCTATTCCATTAAGAAGGCCTATGTCTCCATGATGGGTTCTTGGATCAGACTTGCTGCCACTGAACTAATATGGGGCAGATATTCCTTGCCTAAGCATGCTATATTCTTGTGGTTAGCTAACCAATCAAGACTTTTGACTAAAGATAGGCTCCTCAGATTTCAGATTCCAGTTTTTGATCCTAAATTTGTATTCTGTCACCAAGAGTTAGAATCCCATGAACATTTATTCTTCAAATGTCAGTTCTCTTCATCTATTCTGAGAGGGGTTGCAGGTTGGCTACAAATGGGAAGTTGTCCTATAAATTTTGAACAATGGCCTGGGTGGATTATGAAGAGGAAGCACAACAAATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_228796.p2 GENE.R_Transcript_228796~~R_Transcript_228796.p2 ORF type:complete len:320 (+),score=29.79,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.3e-17 R_Transcript_228796:2020-2979(+)
MKEELINLTGFAKGSFPMKYLGMPISPTKWSKMDCNFLVEKLTARIHCWATRHLTLAGRVQLINSVLISLHTYWATIFIIPSAVIKMIEQTYTTFLWGQTIERTKIPLVCWEKICLPKKYGGLNIRRCAIWNKAAIGKHLWCIAMKQDVLWVKWVNEIYLKGKDLHEYSLPHDCSWYWCKLMKLRNSNIVSNGTWPVSPTGIYSIKKAYVSMMGSWIRLAATELIWGRYSLPKHAIFLWLANQSRLLTKDRLLRFQIPVFDPKFVFCHQELESHEHLFFKCQFSSSILRGVAGWLQMGSCPINFEQWPGWIMKRKHNKY*

Click here to download the sequence:
Link to NCBI Protein BLAST