Transcript Information: R_Transcript_228926.p1


Annotated TAIR IDAT5G11380.1
Annotated Gene Name1-deoxy-D-xylulose 5-phosphate synthase 3
Annotated Gene Symbol(s)DXPS3
Annotation TypeOrtholog
Chromosome Positionchr5:3630172-3633250 | Forward length=700
E-Value1.4E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8914942136964
Replicate 22.7710853341307
Replicate 32.6743906838147
Condition 2: 8 Hour
Replicate 13.1073432674169
Replicate 22.0431262596007
Replicate 33.3170455956037
Condition 3: 24 Hour
Replicate 14.8945578861095
Replicate 23.0228019799268
Replicate 33.8886784976721


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_228926.p1 GENE.R_Transcript_228926~~R_Transcript_228926.p1 ORF type:complete len:197 (+),score=19.48,Transketolase_C|PF02780.16|1.3e-28 R_Transcript_228926:218-808(+)
ATGAGCCCCAAGTTCAAAACTTCAATGAATTTAGTCATTATTATAGAATATATAAGCTACAATTACATGATGAAAGTTATTTGTTTTCATTTTTGTAAGTTCCTATGGCTCTTGGATGGACTTTTCCTCAGTTCTAGAAATATTTTTGTACAACAGATAGGCAAGGGAAAAATTCTGTTTGAAGGAAAACACGTTGCTTTGCTTGGATATGGTGCCATGGTCCAGAACTGCGTCTCAGCTCGGTCCCTTCTTTTGAAACTTGCAGTGGAAGTTACTGTTGCCGATGCAAGATTTTGCAAGCCCCTTGACATTGAGCTTGTAAGAAATCTTTGTGAAAATCATGCCTTTTTAATTACTGTTGAGGAAGGATCCATGGGTGGATTTGGGTCCCATGTCGCCCAATTCATCGCCCTCGATGGAAAGCTTGATGGAAGAGTCAAGTGGAGACCAATTGTTCTGCCAGATACCTACATCAAACACGCTTCTCCAAACGAACAGCTGACTCGTGCGGGGCTGACCAGCCATCATATTGCTGCTACTGCATTATCATTACTAGGTCGGACTCGAGAAGCCCTCCTGCTGATGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_228926.p1 GENE.R_Transcript_228926~~R_Transcript_228926.p1 ORF type:complete len:197 (+),score=19.48,Transketolase_C|PF02780.16|1.3e-28 R_Transcript_228926:218-808(+)
MSPKFKTSMNLVIIIEYISYNYMMKVICFHFCKFLWLLDGLFLSSRNIFVQQIGKGKILFEGKHVALLGYGAMVQNCVSARSLLLKLAVEVTVADARFCKPLDIELVRNLCENHAFLITVEEGSMGGFGSHVAQFIALDGKLDGRVKWRPIVLPDTYIKHASPNEQLTRAGLTSHHIAATALSLLGRTREALLLMC*

Click here to download the sequence:
Link to NCBI Protein BLAST