Transcript Information: R_Transcript_228940.p1


Annotated TAIR IDAT3G05200.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL6
Annotation TypeHomolog
Chromosome Positionchr3:1477377-1478573 | Forward length=398
E-Value1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5789214766133
Replicate 23.2468505798399
Replicate 33.4635616983873
Condition 2: 8 Hour
Replicate 14.2071932899047
Replicate 23.7652343993749
Replicate 35.6762768606708
Condition 3: 24 Hour
Replicate 13.3923907587329
Replicate 23.2590245096042
Replicate 34.8137907215169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_228940.p1 GENE.R_Transcript_228940~~R_Transcript_228940.p1 ORF type:3prime_partial len:291 (+),score=-11.95,zf-RING_2|PF13639.2|1.8e-12,zf-RING_11|PF17123.1|6.1e-09 R_Transcript_228940:76-945(+)
ATGAAAATCTTACTACTACTATCAATCCTCTTTCTATTTTTTTCTGATCAACATTTCTTTGTAATGGTAAGAGCACAAGGCAAGGGCAAAAATAATAATAACCAAAACAAAAACCATGACCCCTTATACACCGCCGTAACCATCATTGTCTTCAGTGTTATCTTCATCGTCTTCTATCTCCTTTTCTATTACTTCCTCAACAATTTCTTCCGAGCCACGTTCTTGGGCCGCGAGGCCAGGCCGGTCCAATCCCAGCCACGGACCGACGGGCTGGACGAGGCCCTCGTCCAGTCCTTCCCGACCTTCGCCTACGCCGAGGTGGCGGCCCACAACAAGGGCCCACCGATGGAGTGCGCCGTTTGTTTAAGCGCCTTTGAGGGTCATGAAACGCTGCGTTTGTTGCCCACGTGCGATCACGTGTTCCACCGTGGGTGCGTTGACCCTTGGCTTGAAGCTCACACTACGTGGCCCTTTTGTCGTGCCAACCTTGTTCCTCAACTCTGTGAGTTGACTCCGGAGGAGGATGAGGAGGGGCCGAGTCAGGTGGTGGAAGTCAACGGAGTGCAAGACGACGTCGCGGGTGTGAGTGATCTTGAGGAGGGGGTGATGGTTGGCAAAGGAGGGATGGTTTGGAGATGGAATTCAACGGGACACGTGGCACTAATTGATAGGGTAATGTGGTTAGAGAGTGGGGACAGGTTTACGCTAAGATTACCACAGAAGGTTAGAAGAGATTTTGTGACAGGCAAGCTACGTAGGACTAGAAGTTGTATCACTGTTTTTTTTTTTTTTTTTTTTTGGTCCTGCCAACCGGTAATCCAGCCCACTGGGCTGACTAATCCGGTTTCGGAGCGGGTCCTGGGGTTAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_228940.p1 GENE.R_Transcript_228940~~R_Transcript_228940.p1 ORF type:3prime_partial len:291 (+),score=-11.95,zf-RING_2|PF13639.2|1.8e-12,zf-RING_11|PF17123.1|6.1e-09 R_Transcript_228940:76-945(+)
MKILLLLSILFLFFSDQHFFVMVRAQGKGKNNNNQNKNHDPLYTAVTIIVFSVIFIVFYLLFYYFLNNFFRATFLGREARPVQSQPRTDGLDEALVQSFPTFAYAEVAAHNKGPPMECAVCLSAFEGHETLRLLPTCDHVFHRGCVDPWLEAHTTWPFCRANLVPQLCELTPEEDEEGPSQVVEVNGVQDDVAGVSDLEEGVMVGKGGMVWRWNSTGHVALIDRVMWLESGDRFTLRLPQKVRRDFVTGKLRRTRSCITVFFFFFFWSCQPVIQPTGLTNPVSERVLGLR

Click here to download the sequence:
Link to NCBI Protein BLAST